| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0508 |
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| Symbol | |
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| ID | 8724236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 624586 |
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| End bp | 625473 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003385371 |
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| Protein GI | 284035441 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.3342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACAGC CTCTACGCAA AGACCTTGAA CCCGTTGCGG CTTCATTCAT CGTAAAAGAA
TTGGTGGAGC CTCACTTCGA CCCAAACTGG CACTTCCACC CTCACTATCA ATTATTTTTG
GTAGAAAAAG GGACAGGCAC TCGCTTCATT GGTGATTCGA TAAAACCCTT TGGCCCTGGC
GATCTGGTTT TCCTGGGGCC AAACTTACCC CACCTCTGGC GTAGTGATCA GGTGTATTTT
GATCGGCAAC CGGACTCAAA TCCAGCCGAA CTGATCACGC GGGGCATTGT CGTTTATTTT
ACCGAGGATT TTCTGGGACC TGATTTTTTC GAGAAGCAGG AAATGACCCC ACTTCGGCAA
TTACTGAATC AGTCGCGGCA AGGGCTCGAA TGGATGGGAC CCACGCGCGG TCAGGCCGAG
AAAGCCCTGA AAAACCTGTC CAAACAGCCG GTAGGGTTCC AGCGCGTTAT TAGTTTACTG
ACGCTCTTGA ATGACCTCAC GCTGGCCACC GACTTCCGGT ATCTGACCAG TCCGGGTTAT
ACAAACACGG TCAAACCAGC CGAAACAGAC CGAATGCAAC TGGTTCATGA CTACGTACTA
GGGCACTTCC CGGACGATCT CAGCCTCGAT ACTGTTGCCG ATCTGGCAGG CATGACGTCG
CCCGCTTTTT GCCGGTATTT TAAGGCAAGG GCGAATAAAA CGTTTTCGGA GTTCGTTTCG
GAAGTTCGCA TCGGTCATGC CTGTAAGCTG CTCATGAACG GGAAGTTGAA CATTACTCAG
ATTAGTTTTG AGAGCGGCTT CCGGACCTTG TCGAACTTCA ACCGCCAGTT CAAAGACATC
ACCGGTCAAA CGCCCTCCGG CTACGTTAAA ACATATCGGC GCTTGTAA
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| Protein sequence | MKQPLRKDLE PVAASFIVKE LVEPHFDPNW HFHPHYQLFL VEKGTGTRFI GDSIKPFGPG
DLVFLGPNLP HLWRSDQVYF DRQPDSNPAE LITRGIVVYF TEDFLGPDFF EKQEMTPLRQ
LLNQSRQGLE WMGPTRGQAE KALKNLSKQP VGFQRVISLL TLLNDLTLAT DFRYLTSPGY
TNTVKPAETD RMQLVHDYVL GHFPDDLSLD TVADLAGMTS PAFCRYFKAR ANKTFSEFVS
EVRIGHACKL LMNGKLNITQ ISFESGFRTL SNFNRQFKDI TGQTPSGYVK TYRRL
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