Gene Slin_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0486 
Symbol 
ID8724214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp601475 
End bp602518 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content52% 
IMG OID 
ProductAcetamidase/Formamidase 
Protein accessionYP_003385349 
Protein GI284035419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.123442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCCCT TATTAACCCC AACGACAAAA ACGGCAGCCG CCATCAAACC TGACCATGTG 
GTTCGTTCAT TGCCCGAAAA TATGGTGTGG GGTTATTTCG GGGCTGATGT ACCGCCGGTC
TATAAAGTGA AGGATGGCGA TGTTGTCGAA ATTCAGACCG TCAATCCGTC GGGGGTGAGT
CGGACCAACC CGGAAGAATT TTATACTAAA AACAACCTGC CCCTCGATCA GCACGCGCAG
GAAGTAGTCG CCATTATGAA AAACGTGAAG CCCGAACCAT CGGGAATTCG CGGGCATATG
CTGACGGGGC CTGTTTACAT CGACGGGGCG CAACCCGGCG ACACGCTCGA AATCCGCATT
CTCGATTTGA CGTTTCCGGC TCCCTTCGGC GTCAACAGCG TCTGGCCGGG CGGGGGCGGC
ATTCCCGACG AAGTCAAAAC CCGTGAGACC TTCGTGTATC GGTACGATGC AAAACGAAAA
ATGGCCACAT TAAAAGAAGG CGTCGAAATT CCATTAAAGC CATTTATGGG CGTTATGGCC
CTGTCACCCC CGGCCGATAT GGGACGGCAG AGTTCGATAC CGCCTAACTT TTTCGGTGGT
AATCTGGACA TTAAACATTT AACCAAAGGC ACAACCTTGT TTTTACCCGT TTCCGTACCC
GGCGGTCTAT TCACCACCGG AGATGGGCAC GGGGCGCAGG GTAACGGCGA AGTGAGTGGT
GTTGCCATCG AAACGGCCAT TAACCTGACC GTCAAATTCA TTGTCCACAA AGGCAAAGCC
TCGAAACAGC CCCGCGCCGA AACGCCCACG CATTTTATTG CCGTTGGCTT GGACAAAGAC
CTGAACAAAG CGATGAAGAA TGCCCTTTCC GAAGCCTGCG CCTTCATTCG GGATGAGCTT
GGCTTTACCT TCAACGAAGC CCTGTCCATT GCCAGCACCG CCGTCGACTT TGAAGTCAGT
CAAGTAGTTG ATCAGACGCT GGGCGTTCAT GCGATGATTC CAAAGTCCAT TTTTACGAAG
AAGAAATTTG ATTTCTGGGC GTAA
 
Protein sequence
MSPLLTPTTK TAAAIKPDHV VRSLPENMVW GYFGADVPPV YKVKDGDVVE IQTVNPSGVS 
RTNPEEFYTK NNLPLDQHAQ EVVAIMKNVK PEPSGIRGHM LTGPVYIDGA QPGDTLEIRI
LDLTFPAPFG VNSVWPGGGG IPDEVKTRET FVYRYDAKRK MATLKEGVEI PLKPFMGVMA
LSPPADMGRQ SSIPPNFFGG NLDIKHLTKG TTLFLPVSVP GGLFTTGDGH GAQGNGEVSG
VAIETAINLT VKFIVHKGKA SKQPRAETPT HFIAVGLDKD LNKAMKNALS EACAFIRDEL
GFTFNEALSI ASTAVDFEVS QVVDQTLGVH AMIPKSIFTK KKFDFWA