| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0441 |
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| Symbol | |
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| ID | 8724169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 547991 |
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| End bp | 551095 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003385304 |
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| Protein GI | 284035374 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000408448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCAA CAATTACCCA ACCACCACGC CTGGCGTGGC TTCCTCTGCT TGGCTTAGCG
GCACTTACGC TGGTAAGCCA ACCGGCGTTT AGTGCGCCAC CAACAGTAAA ACTTAAGTTA
GCCAGCCCAA CTCAGGAACG CTCCGTTGCT GGTAAAGTAT TATCAGGCGA TGATAACACT
GGATTACCGG GTGTAAGCGT TGCCGTGAAG GGCACCACGC GCGGTACAAC TACTGACGCT
AACGGCGAGT ACAAAATCAG CATACCTAAC GAACGGGCTG TTCTGGTTTT CTCCGCTGTT
GGCTTTATTA GCCAGGAAGT TACTATCGGC AATAAGTCAA CGGTTAATCT AACCCTAAGC
ACTGATACAC GCGCCCTGAA TGAAGTCGTT GTTATTGGCT ACGGTTCTCA GAAAAAGAGC
CAGACAACGG GAGCTATTTC GTCAGTTACG CCAAAGCAAA TTACAGAACA GCCTATTACC
AACATTGGTC AGGCCATGCA AGGCCGGGTA GCAGGTGTCG ACGTAGCACA GTCGGGTAGC
CGACCAGGTT CCGTACCAAC AATCCGGGTT CGTGGGCGTC GTTCGTTCAA TGCCGGTAAC
GACCCGCTCT ATGTAGTTGA CGGGATTCCC CTTTCAGAAG GTTATGAAGA CATTAACCCG
AACGATGTGG GTTCGATGGA AATCCTGAAA GATGCTACCG CAACGGCCAT TTATGGTGCC
AGAGGTGCCA ATGGCGTTAT TCTGGTTACA ACCAAGCGGG GTAATCCGGT TGGTAAAACA
ACCATCAGCT ACGATAACTA CGTCGGTTTT ACCGATGCGC TGGATAAAGT AAAGCTGTTC
AGTGGCTCTG AATTTGCCGA ATTTGTTCGG GAAGCTTACC GGACTACAGG CAACTACAAA
GACGCGAACG GCAATCCCGT TCCAACGGGT GTGGCCGATC CATATGCCGA CTCCAAAGTG
GCGGTACTGG GTGGTGACCC GAACGTTGCA GCTGGCCTTG CCGCCAACCG GAATACTGAC
TGGCAGTCGT TGATTCTGAA GCAGGGAGTT CAGCAGAATC ACTCGTTGGG TATTCAGGGC
GGCAACGAGA AAACGCAGTT TTATATATCG GCTGGTTTTT TCCAGGACAA AGGGATTATG
CCTGGTCTGG ACTTTACCCG TCAGTCGCTG CGTGCCAATA TTGATCACCA GATCAACAAG
GCTCTTAAAG TGGGGATTGC CTCGTATATG ATGTATAGCG TACGGAACGG AGAGACGCTG
AACCCCTATA ACTTTACCCT TCAGCAAAAT CCGCTTGGTC GGCCTTACGA CGATAACGGT
AACCTGATCT TCTCGCCTAC GAACGATGCG CTGCTTACCA ATCCACTCGC CGAAGTTGTG
CCGGGTGCTC AGGTAGAGAA TAGAAAGAAA TACCGCATTT TCAACAGCGT TTACGCAGAA
GTAAACATCC TTGAGGGCTT AAAATACCGC GTTAACTTCG GGCCAGACTT TACCATCAAC
CGATTTGGCC GCTTTATCGG TGCGCAAACA AACGCCCGGA AAGGTGGTGA CCCACAGGCG
CAGACGGCCA GTGCATTTGG CTTCAACTAC ACGCTGGAGA ACGTGGTGAC GTATAACAAA
AAAGTGGGCG ATCACAACTT CGGTTTTACC GCCCTGCAAT CCATTCAGCG GGATAACTTC
GAGCAGAATA ACATCTCTGT TCAAGGTGTG CCAGCCGAAT CGCAGCAGTT CTACAATGTA
GGCAACGCCA GTGCTGTATT GGGAGTAGGT AGTGGATTGC GGCAGTGGAC CATTAACTCG
TACATGGGTC GTATCAACTA CGATTATAAA GATAAGTACC TGGTAACCGC TACGTTGCGC
CGGGACGGAT CGAGCCGATT TGGCGAAAAT ACCAAATATG GTAATTTCCC CGGTATCGCC
CTAGGCTGGA ATGTCAGCAA CGAAGACTTC ATGAAGGGAT CTAGCTGGGT CGATCTGCTA
AAAATCCGGG CCAGCCGTGG TTCGGTAGGT AACCAGGGTG TAGCTCCCTA TCAAACGCAG
GGATTATTGG ACCGCACGGT ATATGCCTTT GGCAATACAC CCGCTTATGG CTATCGCCCT
AACACGATTG GCAACCCTGA TTTGCGCTGG GAAACGTCAA CCAGCACAAA CATTGGTATT
GACTTCAGTC TCTGGCGGGG CCGGGTATCA GGTGCTATTG AATTATATAA TACCCGCACG
ACCGACCTGC TACTATCCGA TCTGCTGCCT ACATCAATCG GTTTCAACTC TGTGACCCGC
AACATTGGCG AGACCCAGAA TAAAGGGATA GAAGTGAGTG TATCAACGGT GAACGTGAAT
TCAAAAAGTG GATTCAAATG GACATCCGAC ATTGTGTTCT CTAAAAATTC GGAAGCCATC
ATCTCCCTTT TCAACGGACC GGTTGATGAC GTGGGTAACA AACGCTTCAT TGGCAAGCCT
TTGACGGCCA TGTATGATTA CAAAAAAGCG GGTATCTGGC AAACCAGTGA AGCAGATGCC
GCTAAATCCT ACCAGAGTGC AGTTGGCCAG ATTAAAGTGC AGGACACCAA CGGCGATGGT
AAAATCACGG CTGATGACCG GGTATACTTA GGCTCTGACA TTCCAACCTG GAGTGGCGGT
ATCACGAACC GGTTCAGCTA TAAAGGATTT GACCTGAACT TCTTTATTTA TGCCCGTATT
GGCCAGACCA TTCTAAGCGG TTTCCACCGC GACAACAACC AGTTGGCTGG TCGTTATGAG
CAAATCAAAG TTGACTACTG GACACCTAAC AACCCAACGA ACGAGTTCCC ACGGCCTAAC
TCCAGCCAGG AGTTCCCGGT CTATAACTCA GCTATCATCT ATTTCGATGG ATCGTTTGTG
AAAGTACGGA ACATCAACTT TGGTTATACG TTCCCATCGA GCATTACGTC GAAACTGCGC
ATGCAGTCGC TACGTCTGTT CAGTAGCATT CAGCAGCCGT TCATCTTCTC GTCGTACCGG
TCGAAGTACA ACGGTGTTGA CCCAGAGACA AGCGATGGCA CGGTAAGCAA CGGTGTTACG
CCTGCTACCC GCGTAGTAAC CTTTGGTTTG AACGTCAAAT TCTAA
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| Protein sequence | MHSTITQPPR LAWLPLLGLA ALTLVSQPAF SAPPTVKLKL ASPTQERSVA GKVLSGDDNT
GLPGVSVAVK GTTRGTTTDA NGEYKISIPN ERAVLVFSAV GFISQEVTIG NKSTVNLTLS
TDTRALNEVV VIGYGSQKKS QTTGAISSVT PKQITEQPIT NIGQAMQGRV AGVDVAQSGS
RPGSVPTIRV RGRRSFNAGN DPLYVVDGIP LSEGYEDINP NDVGSMEILK DATATAIYGA
RGANGVILVT TKRGNPVGKT TISYDNYVGF TDALDKVKLF SGSEFAEFVR EAYRTTGNYK
DANGNPVPTG VADPYADSKV AVLGGDPNVA AGLAANRNTD WQSLILKQGV QQNHSLGIQG
GNEKTQFYIS AGFFQDKGIM PGLDFTRQSL RANIDHQINK ALKVGIASYM MYSVRNGETL
NPYNFTLQQN PLGRPYDDNG NLIFSPTNDA LLTNPLAEVV PGAQVENRKK YRIFNSVYAE
VNILEGLKYR VNFGPDFTIN RFGRFIGAQT NARKGGDPQA QTASAFGFNY TLENVVTYNK
KVGDHNFGFT ALQSIQRDNF EQNNISVQGV PAESQQFYNV GNASAVLGVG SGLRQWTINS
YMGRINYDYK DKYLVTATLR RDGSSRFGEN TKYGNFPGIA LGWNVSNEDF MKGSSWVDLL
KIRASRGSVG NQGVAPYQTQ GLLDRTVYAF GNTPAYGYRP NTIGNPDLRW ETSTSTNIGI
DFSLWRGRVS GAIELYNTRT TDLLLSDLLP TSIGFNSVTR NIGETQNKGI EVSVSTVNVN
SKSGFKWTSD IVFSKNSEAI ISLFNGPVDD VGNKRFIGKP LTAMYDYKKA GIWQTSEADA
AKSYQSAVGQ IKVQDTNGDG KITADDRVYL GSDIPTWSGG ITNRFSYKGF DLNFFIYARI
GQTILSGFHR DNNQLAGRYE QIKVDYWTPN NPTNEFPRPN SSQEFPVYNS AIIYFDGSFV
KVRNINFGYT FPSSITSKLR MQSLRLFSSI QQPFIFSSYR SKYNGVDPET SDGTVSNGVT
PATRVVTFGL NVKF
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