| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0349 |
|---|
| Symbol | |
|---|
| ID | 8724077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 443455 |
|---|
| End bp | 444786 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | xylose isomerase |
|---|
| Protein accession | YP_003385212 |
|---|
| Protein GI | 284035282 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACAA TCACGCTGGG TAACCAGGAA TTCTTCCCCG GTATTGGTGC CATCGCTTAT
GAAGGCCCTA CCTCAAAAAA TCCTCTTTCG TTCAAATGGT ACAATCCGGA TTTGGTTATT
GGCGGAAAAA CCCTGCGCGA GCAGTTACGA TTTGCCATTA GCTACTGGCA TACATTCACC
GGAACCGGGG GTGACCCCTT TGGTCCCGGC ACGCGTGTTT TTGCCTGGGA TCAGGATAAC
GATGCCGTTG GTCGGGCTAA ATTAAAGATG GATGCCGCCT TCGAGTTCAT CACCAAAATA
GGCGCACCTT ACTATTGCTT TCACGATGTC GATCTGGTCG ATGAAGCACC TACGGCAGCC
GAATACGAAA AACGGCTGCA GGCCATTGTC GAGTATGGGC AGCAGAAGCA GAAAGAGAGT
GGCGTAAAGC TGCTGTGGGG AACGGCCAAC GTATTCTCCA ACCCCCGCTA CATGAACGGG
GCATCGACCA ATCCCGACTT TGCGGTGCTG GCCTACGCGG GCACTCAGGT GAAAAACTCA
ATCGACGCAA CGATTGCCCT TGGTGGCGAA AACTACGTAT TCTGGGGCGG TCGCGAAGGG
TATATGTCGC TTTTGAACAC CAACATGAAG CGCGAAGTAG AGCACCTGGC GAAGTTCTTG
ACCATGGCCC GCGATTATGC CCGTAAGCAA GGCTTTAAAG GTACGTTCTT CATTGAGCCA
AAGCCTATGG AGCCTACCAA GCACCAGTAC GATTACGATG CAGCTACCGT TATTGGCTTC
CTACGCCAGT ATGGTCTCGA CAAAGATTTT CAGTTAAACA TTGAAGTAAA CCACGCGACG
CTGGCGGGCC ATACCTTCGA TCATGAATTA CAGGTGGCCG CTGACGCGGG TATGCTGGGC
AGCATCGACG CCAACCGGGG CGATTACCAG AATGGCTGGG ATACCGACCA GTTTCCGATC
AATCTGTATG AGCTGGTCGA AGCGGCCCTG GTGATTCATC AGGCAGGCGG CATTAAGCCC
GGCGGCATTA ACTTCGACGC CAAAGTACGG CGTAATTCAA CCGACCTCGA AGACCTATTC
GTGGCACATA TCAGCGGCAT GGATGCGTTT GCCCGCTCGT TTATCGTAGC CGATAACATC
CTGAAAGACT CGGACTACCT GAAATTCCGT AGCGAACGCT ATGCCTCGTT CGATGGCGGC
CAGGGTAAAG CGTTTGAAGA AGGCAAATTA ACGCTCGAAG ACCTCCGCAG CTATACCCTG
GAAAATGGCG AGCCACAACT TCGCAGCGGC AAGCAGGAAT GGCTCGAAAG CATTATCAAC
CAGTACATCT AA
|
|---|
| Protein sequence | MSTITLGNQE FFPGIGAIAY EGPTSKNPLS FKWYNPDLVI GGKTLREQLR FAISYWHTFT
GTGGDPFGPG TRVFAWDQDN DAVGRAKLKM DAAFEFITKI GAPYYCFHDV DLVDEAPTAA
EYEKRLQAIV EYGQQKQKES GVKLLWGTAN VFSNPRYMNG ASTNPDFAVL AYAGTQVKNS
IDATIALGGE NYVFWGGREG YMSLLNTNMK REVEHLAKFL TMARDYARKQ GFKGTFFIEP
KPMEPTKHQY DYDAATVIGF LRQYGLDKDF QLNIEVNHAT LAGHTFDHEL QVAADAGMLG
SIDANRGDYQ NGWDTDQFPI NLYELVEAAL VIHQAGGIKP GGINFDAKVR RNSTDLEDLF
VAHISGMDAF ARSFIVADNI LKDSDYLKFR SERYASFDGG QGKAFEEGKL TLEDLRSYTL
ENGEPQLRSG KQEWLESIIN QYI
|
|---|
| |