| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0347 |
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| Symbol | |
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| ID | 8724075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 441008 |
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| End bp | 442576 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003385210 |
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| Protein GI | 284035280 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.242051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCTG ATCGTACTAA AGAAACAAAA ACGCAGGCCA GCACACAGTC TGGCCATCTA
CCTGTCAATC AAACCCGTAC GGGCGTTTCG GGGGTCCATT ACGAAATCTT TGTTCGCTCC
TTTGCCGACT CCAACGGCGA CGGCATCGGC GATCTGAACG GTATTACCGG CAAACTTGAT
TACCTGAAAG ACCTGGGTGT TTCGGCCATC TGGCTGATGC CCATCAGTCC ATCGCCAACG
TACCATAAAT ACGACGTTAC CGACTATTAC GGCATCGAAC CTGAATATGG TACGCTTGAC
GATTTCAAAC GACTTATCAC CGAAGCCCAC AAGCGCGGCA TTGCGGTTAT AATTGACCTC
GTTCTACACC ATACCAGTAT CCGGCATCCG TGGTTTCAGG AAGCCGCCAA AGGCCCCGAT
AACCCATACT GGAATTACTA CAAATGGCTG CGCCCCGACG AGATTAAACG GCGTAGACTA
GCCACACGAG ACATTACAGC CGATTCGGGC GAGAAAAACC CATGGCATTC GGTAGCGGGA
GCTACTTATC CGGAGAAATA CTACGGGATG TTCTGGAGCG GTATGCCCGA CCTCAACTTC
GACTATCGGC CCCTTCGGGA AGAGGTGTTT GCCATTGCCC GGTACTGGCT CAACGAGATT
GGAGTCGATG GGTTCCGGCT CGATGCTGCC CGGCATTTGT ACCGGGAAGC TGAAGAACCC
AAAAACCATG AGTTCTGGCA GGAGTTCGGG CGGGTTGTGG AAGCCGCCAA ACCCGGCGCG
TATACCGTCG GCGAGGTCTG GACACGACCG GAACATATTG CCCCGTATTT CCGGGGACTG
AAAGCCAACT TCAACTTCGA CCTGCAACTG ATGATTGCCG AAATCGTCGG GCAGGAGAAT
GATACTGAAG ACCTGGTCGA ATACCTGACG TATGTACATA ATACATTCGC AACGGTCAAC
CCCGAGTTTA TTGATGCGTT GCTGCTGTCG AACCACGATC AGAACCGCAT TGGCAGTTTA
CTCAAAGGCA ACCTGACGCA TCTGAAAGTA GCCGCTAACC TGTTACTCAC GCTTCCGGGC
CTCCCCTATC TTTATTACGG TGAAGAAATT GGTATGCTTG GTATGAAACC CGACGAAACC
ATCCGTGAAC CCTTTTTGTG GGACGTCCGA GCCAACGATA CCCAGCGCAC CCGCTGGCGC
CGGGGAAAGT ACAGTACCAG CCAAACAGTG CGGCCACTGG CCCAACAGCA AAGCGATCCC
GATTCCCTGT TCAATCATTA CAAGCGCCTG ATTCACTACC GAAACAGTCA CCCTGTTCTG
AATGACAACC TAAGTCGGTT AGTAACTACG GGCATTCGCC AGAAGGGCAT CATTGCCTTT
AGTCGGCAGC GACCGAGTGG CGGCCCCTGT GTTTTAATTA TCCACAACCT GACCAAAAAA
CCGATCGAGG TCGTCTTCTC GCCCAGTGAG GACTGGTGTC GCTGTGTGGT TTTTGAAACG
ATTCCCGGTA GCTCATTCGT CGGCGACCGC GTAACCGTTC CGGGTTATGG GTGTGTGATC
GTAGAGTAA
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| Protein sequence | MHADRTKETK TQASTQSGHL PVNQTRTGVS GVHYEIFVRS FADSNGDGIG DLNGITGKLD
YLKDLGVSAI WLMPISPSPT YHKYDVTDYY GIEPEYGTLD DFKRLITEAH KRGIAVIIDL
VLHHTSIRHP WFQEAAKGPD NPYWNYYKWL RPDEIKRRRL ATRDITADSG EKNPWHSVAG
ATYPEKYYGM FWSGMPDLNF DYRPLREEVF AIARYWLNEI GVDGFRLDAA RHLYREAEEP
KNHEFWQEFG RVVEAAKPGA YTVGEVWTRP EHIAPYFRGL KANFNFDLQL MIAEIVGQEN
DTEDLVEYLT YVHNTFATVN PEFIDALLLS NHDQNRIGSL LKGNLTHLKV AANLLLTLPG
LPYLYYGEEI GMLGMKPDET IREPFLWDVR ANDTQRTRWR RGKYSTSQTV RPLAQQQSDP
DSLFNHYKRL IHYRNSHPVL NDNLSRLVTT GIRQKGIIAF SRQRPSGGPC VLIIHNLTKK
PIEVVFSPSE DWCRCVVFET IPGSSFVGDR VTVPGYGCVI VE
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