Gene Slin_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0346 
Symbol 
ID8724074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp439953 
End bp440879 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content50% 
IMG OID 
Productpeptidase M28 
Protein accessionYP_003385209 
Protein GI284035279 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0132197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAG TTTTTTTATT GCTGTTATTA CCCACTTTTC TCTTCGCCCA GACGCCCTCT 
GCCAAACGAA TTACCCGACA CATCAACAAG CTCGCGTCTG ATAAAATGAA AGGACGAGGT
ACCGGAAGTC CCGAAAACGT AAAAGCCGCC GGGTACATTG CCGCTTACTT TCGGAAAGCC
AATCTCACTC CGCTGGGTAC AAACGGGTTT TACCAGCCCT TCACCGCTAA AGTCAGGCGG
GTAGTTGTTC CCGACAGCCT GCGTGAAGCC ACCAATGTGC TGGGCTACCT CGATAACGGG
GCTCCCTTTA CTATTGTCAT CGGTGCGCAT TATGACCACC TGGGCCTTGG TAAACAGGGC
AGCTCGCTGG ATTCGCTGCC CCAGGGCAAA ATTCACAACG GGGCCGATGA TAATGCCTCC
GGAGTAGCTG GGTTGCTCGA AATGGCGCAT TATTTTTCAA AAAATGCCGT CAAAGAGCCG
TATAACTTCC TCTTTATAGC CTTTGGTGCT GAGGAGCTGG GGCTGCAGGG GTCCCGTTAT
TTTCTCAATA ATCCAACAAT CCCAATAGCC AAACTGAACT TCATGGTGTG TATGGACATG
ATTGGACGAT ATAACCCCGA CCGTGGTGTT GGCATCGGCG GCTTTGGTAC CAGTGATACC
TGGCCCACCG TCTTTAAAGG GGTTAAAAGT TCGATAAAAT TCTTTACTGA CCGGGCGGGT
AATGGTGGCT CCGATAATGC GGCCTTTTAT GCCAGACAGA TTCCCGTTCT GTTTTTCCAC
ACGGGGGGGC ATCCGGACTA CCATAAGCCC ACCGATGACC CGGAAAAAAT TGATGCCACC
GCCGAAGAGG CCATCTTAAA ACTTGAAATC CAACTTATCG AAAACGCCAT GCAGCAGCCC
AAAATGGTGT TTACGCCCGT GAAATAA
 
Protein sequence
MKSVFLLLLL PTFLFAQTPS AKRITRHINK LASDKMKGRG TGSPENVKAA GYIAAYFRKA 
NLTPLGTNGF YQPFTAKVRR VVVPDSLREA TNVLGYLDNG APFTIVIGAH YDHLGLGKQG
SSLDSLPQGK IHNGADDNAS GVAGLLEMAH YFSKNAVKEP YNFLFIAFGA EELGLQGSRY
FLNNPTIPIA KLNFMVCMDM IGRYNPDRGV GIGGFGTSDT WPTVFKGVKS SIKFFTDRAG
NGGSDNAAFY ARQIPVLFFH TGGHPDYHKP TDDPEKIDAT AEEAILKLEI QLIENAMQQP
KMVFTPVK