Gene Slin_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0333 
Symbol 
ID8724061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp425722 
End bp426321 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content49% 
IMG OID 
ProductYceI family protein 
Protein accessionYP_003385196 
Protein GI284035266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.192845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.888817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC TTGTATTTTC CGTCGCTGCC CTGCTTAGCC TGTCAACTGC TTACGCGCAA 
ACCTGGGCGG TGGATAAATC GCACTCTCGC GTAGGCTTTA CACTTACGCA CAATTTGCTG
TCGGATGTTG ACGGTAACTT CAAATCGTTC GATGCCAAAA TCTCCTCGGC AAAAGCAGAT
CTGTCGGATG CTACGTTCGA GTTAACCGCC GATGTGAATA GCATTAATAC CGACAATGAG
CGTCGGGACG GTCACCTCAA AAGCCCCGAC TTTTTCGATG CGGCCAAGTA TCCGGGCATA
ACGTTCAAGA GCACATCGTT TAAGAAAGTT GAAGGAAAGC AGTATAAGCT GGTTGGCGAC
TTAACGATGC ACGGCGTTAC AAAACCCGTA ACGCTCAATG TGATTATGGT TGGCCCCGTT
CCTATGAAAG GCATGGGTGG TAAAGAGCAG GAAAAAGCTG GCTTTAAAGC GAGCGGCACC
ATCAAACGGT CTGATTTCGG CATAGGCACC ATTCCGGTCG TAGTCGTGAG CGACGAAATT
GAACTTAAAG TGAACGGCGA GTTTACCAAA CAGGATGCCG CCGTTGCGGA AAAGAAGTAA
 
Protein sequence
MKTLVFSVAA LLSLSTAYAQ TWAVDKSHSR VGFTLTHNLL SDVDGNFKSF DAKISSAKAD 
LSDATFELTA DVNSINTDNE RRDGHLKSPD FFDAAKYPGI TFKSTSFKKV EGKQYKLVGD
LTMHGVTKPV TLNVIMVGPV PMKGMGGKEQ EKAGFKASGT IKRSDFGIGT IPVVVVSDEI
ELKVNGEFTK QDAAVAEKK