Gene Slin_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0322 
Symbol 
ID8724050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp409742 
End bp410629 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content51% 
IMG OID 
Productdomain of unknown function DUF1732 
Protein accessionYP_003385185 
Protein GI284035255 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.563369 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAT CAATGACCGG CTTCGGCAAC GCAACAGTGG AGGCCGGTGG CCTGTCGGTA 
ACCGCAGAAG TCAAGACCCT GAACTCTAAA TTTCTGGATA TTTATTGCCG TATGCCCCGT
CAGTTTTCCG ACAAGGAGAT TGAACTGCGG GCTTTGTTAA CCCATCAGCT GGAGCGCGGC
AAAGTAGAGC TTTCGCTCAA TCTGACTCGC ACCAATGCCG TTCGGCCGGG AGTTACCATC
AATCGCCCGT TGGTGGCGGC TTACGTGGCT GACTTAAAGG AAACGGCCAA TACAATGCTG
ATGAGCATTT CGGATGGGGA TGTGCTGCAA CTGGCGCTCC AGCAGCCGAA TGCTTACCTT
ACCGAATCGA CAGACCATAC GGCCGACGTG TCGGATTGGG AGACGGTGCT GGCCGCCGTT
CAGGAAGCCA TCCGCCGGTG CGACGGGTTT CGTAAACAGG ATGGAGCGGT ACTGGAAGGC
AAATTTCAGG AGTACATCCA GATCATTACC GACCGGTTGG CCGATATTGA AGAGCAGGAT
GTAAAACGGA TACCTGCCGT ACGCGACCGG ATGCGCAATT CGGTGCGTGA GTTGCTGGAA
AGTGAATCTT TCGACCATAA TCGTTTTGAA CAGGAGCTAG TCTACTACGT AGAGAAATTC
GACATCTCGG AAGAGAAAGT CCGGCTTAAA AACCACCTGA GCTATTTTCT GGAAGTGCTG
GCCACGGAAG AAGCCAATGG CAAAAAACTC AATTTCATCT CTCAGGAAAT TGGCCGTGAG
ATCAACACCA TCGGTTCCAA AGCCAACGAT TCGTCTATCC AGCGGTTTGT GGTCCAGATG
AAAGACGAAC TGGAGAAGAT AAAAGAGCAG ACGATGAATG TGATTTAA
 
Protein sequence
MLKSMTGFGN ATVEAGGLSV TAEVKTLNSK FLDIYCRMPR QFSDKEIELR ALLTHQLERG 
KVELSLNLTR TNAVRPGVTI NRPLVAAYVA DLKETANTML MSISDGDVLQ LALQQPNAYL
TESTDHTADV SDWETVLAAV QEAIRRCDGF RKQDGAVLEG KFQEYIQIIT DRLADIEEQD
VKRIPAVRDR MRNSVRELLE SESFDHNRFE QELVYYVEKF DISEEKVRLK NHLSYFLEVL
ATEEANGKKL NFISQEIGRE INTIGSKAND SSIQRFVVQM KDELEKIKEQ TMNVI