| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0287 |
|---|
| Symbol | |
|---|
| ID | 8724015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 377501 |
|---|
| End bp | 379945 |
|---|
| Gene Length | 2445 bp |
|---|
| Protein Length | 814 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | phenylalanyl-tRNA synthetase, beta subunit |
|---|
| Protein accession | YP_003385150 |
|---|
| Protein GI | 284035220 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.307167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTTT CCTATAAATG GTTACAAGAG TTCATTGAAT TACCCGAGTC GCCCGAAGAA
GTCGGTAAAA TTTTAACCGC AACGGGACTT GAAGTCGAAG GAATAGAAAA GATAGATGCT
GTACCCGGTG GACTGGCGGG TGTAGTTATT GGCCAGGTAC TAACCTGCAC TAAACATCCC
GATGCCGATA AACTGAGCCT GACTACGGTT GATGTTGGAG CCGAACAGCC CTTACCCATT
GTGTGTGGTG CACCTAATGT GGCGGCTGGC CAGAAAGTGA TTGTCGCACT GGTAGGGGCC
ACACTTTACC CAAGCGCCGG TGAACCTTTT CAGATCAAGA AAGCCAAAAT TCGGGGCGCA
GCTTCCGAAG GGATGATCTG TGCCGAAGAC GAAATTGGTC TGGGCACATC CCACGCAGGC
ATTATAGTGC TGGACCCGGA CGGTCCGGCA TCCCAGCTGC CGAACGGGAC GCCCGCAGCC
CGTTATTTCA ACCTCGAATC AGATTATCAA ATTGCCATTG GGTTAACGCC TAACCGCATC
GATGCCGCGT CTCATTACGG CACAGCGCGC GATCTGAAAG CTGTGCTCAA ACGGCCCCTT
CGCCTACCCT CCGTAGACGC CTTCGCCGTA GCTGGCACAG ACCTGACGCT CGATGTACGC
GTGGAAGATG CGACAGCCTG CCCGCGGTAC GCCGGGGTTA CGTTAAATGG CCTGACCGTT
GGCGAATCGC CCGACTGGCT GAAGCAACGG TTGCTGAGTA TTGGGCTTAA TCCCATCAAT
AACGTCGTCG ACGTAACCAA TTACGTTTGT CATGACCTTG GCCAGCCGCT TCATGCGTTC
GATGCCGCCA GGATTGCAGG CGGTAAGGTC ATCGTGAAAA CATTACCGGA GGGTACGCCT
TTTATAACCC TTGATGGCGT AGAACGGAAA CTAACGGCTA CCGATCTTAT GATCTGCGAT
GCCGAAAAGC CGATGTGTAT TGCCGGTGTT TTTGGCGGTC AGTATTCGGG TGTATCGGCT
CAAACGACCA GCATCTTCCT GGAATCTGCT TATTTCTCCC CAACGTCTGT TCGTAAAACA
GCCCAGCACC ACGGACTGAA AACGGATGCG TCGTTCCGGT TCGAGCGGGG CATTGACCCC
AACATAACGG TATTTGCCCT GAAACGGGCT GCCCTGCTCA TTCAGCAAGT GGCCGGTGGA
ACGGTTAGTT CAGCTATTAC CGATATTTAC CCGACTCCGA TCGAGTCATT CCGGGTGCCG
GTGCGTTACC GCAATATCGA TCGACTAATC GGCATCAAAA TCGACCATTC TGAGATTCAT
CGGATATTGG AAGCACTGGA CATTCAGGCC GAAGAGAAGA CCGACGACGG ATTCCTCGCC
ATTGTGCCTC CTTACCGCGT CGACGTAACA CGGGAGGCCG ATGTTATTGA AGAAATACTC
CGAATATACG GGCTTGATAA CGTTCCCCTG TCGGTAAACC TGGCGGCTGA TTCGTTATCG
GAATTCCCGA AAACAGACCC TGATCAATGG CAAAGCCGGG TTGGCCAGCT ACTGGCGGCC
AATGGCTTTT ACGAAATCCT GACCCTATCA CTAACCCGTC CGGCCTATAA TGATGCCATC
CGGTCGTCAT TGCCGGGCGA GGACGTAACG CTGCTCAATC CCCTCAGCGA GGAGCTGTCT
GTTATGCGGC AAACGCTGCT GTTCTCGGCG CTCGAAACGA TGTTGTATAA CCTGAACCGG
CGGCAGAAAG ACTTGAAGAC ATTCGAATTG GGCAAGGTTT ATCATAAAGT AAAACTTGAC
GATTCGACTA CGAAATACGT TGAACGGGTA CGGATGAGCC TGGCTATTCT CGGCAACCAG
CAACCCGAAA ACTGGCTTCA GAAAGCTCAA CCGGTGGCGT TTCATGACCT GGCCACGGCC
GTTCAGCGGA TACTGAACCT ATTCCGGGTC AAAGCCTACG AAACCCAACC CGCCGACACT
ACCCTTTTCC AGTATGGCGT GACGTATGTT GTCAATAAAA AACCACTGGT CAGTCTGGGA
TTGGTAAACC CCAAACTGAC GAAGCTGGTA GACCTAAAAC AGCCCGTGTT TTACGCCGAC
TTCGACTGGC AGGCGCTGCT CAAACTAGCA ACGACCAAAG TACGCTATGA GGAAGTTTCC
AAATTTCCCG AAGTTCGTCG TGACCTGTCG CTGGTACTTG ATCAGGCCAT TTCGTTCGAA
CAGATCAGTA AGCTGGCCCG GCAAACGGAA CGGAAATTAT TACGGTCTGT GAATGTGTTT
GATGTGTATG AAGGAGAAAA TCTGGGTGCT GGCAAAAAAG CCTATTCAGT CAGTTTTATG
CTTCAGGATA CCGCCCAGAC CCTCACGGAT GCAACAATTG ATAAAACAAT GCAACGGCTC
ATGACGACTT TTGAGCAGGA GTTAGGGGCA GTAATTAGAA AATAA
|
|---|
| Protein sequence | MEVSYKWLQE FIELPESPEE VGKILTATGL EVEGIEKIDA VPGGLAGVVI GQVLTCTKHP
DADKLSLTTV DVGAEQPLPI VCGAPNVAAG QKVIVALVGA TLYPSAGEPF QIKKAKIRGA
ASEGMICAED EIGLGTSHAG IIVLDPDGPA SQLPNGTPAA RYFNLESDYQ IAIGLTPNRI
DAASHYGTAR DLKAVLKRPL RLPSVDAFAV AGTDLTLDVR VEDATACPRY AGVTLNGLTV
GESPDWLKQR LLSIGLNPIN NVVDVTNYVC HDLGQPLHAF DAARIAGGKV IVKTLPEGTP
FITLDGVERK LTATDLMICD AEKPMCIAGV FGGQYSGVSA QTTSIFLESA YFSPTSVRKT
AQHHGLKTDA SFRFERGIDP NITVFALKRA ALLIQQVAGG TVSSAITDIY PTPIESFRVP
VRYRNIDRLI GIKIDHSEIH RILEALDIQA EEKTDDGFLA IVPPYRVDVT READVIEEIL
RIYGLDNVPL SVNLAADSLS EFPKTDPDQW QSRVGQLLAA NGFYEILTLS LTRPAYNDAI
RSSLPGEDVT LLNPLSEELS VMRQTLLFSA LETMLYNLNR RQKDLKTFEL GKVYHKVKLD
DSTTKYVERV RMSLAILGNQ QPENWLQKAQ PVAFHDLATA VQRILNLFRV KAYETQPADT
TLFQYGVTYV VNKKPLVSLG LVNPKLTKLV DLKQPVFYAD FDWQALLKLA TTKVRYEEVS
KFPEVRRDLS LVLDQAISFE QISKLARQTE RKLLRSVNVF DVYEGENLGA GKKAYSVSFM
LQDTAQTLTD ATIDKTMQRL MTTFEQELGA VIRK
|
|---|
| |