Gene Slin_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0220 
Symbol 
ID8723948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp292667 
End bp293395 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385084 
Protein GI284035154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0917921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGCG AATATCATAA ATGGTTTAGC CCGAATCTAA ACCGTGATAT GGAGTTGTTG 
ATTTTGGGCC ATGCGGGCGC GCGGGTGTTG GTATTTCCAA CCCGTCGCGG CCGTTTTTAC
GAGTATGAAT CCTTCGGCCT TGCGGATACC CTGGCCGAAA AAATTGAGAA CGGCTGGCTA
CAACTCTACT GCGTAGACAG CGTTGATCAT GAAAGTGTCT ATAACCGGTC GGCTCATCCC
CACGACCGCA TTCGGCGGCA CAACCAGTAT GAACAGTATA TCATAAATGA GGTACTGCCG
CTTTCCCGCC TGAAAAACCC GCAGCCGTTC ATGATTTCGC ACGGCTGCAG CCTCGGTGCC
TACCATGCCC TGAATATTGC CTTTCGGCAC CCGTACTGGT TTGGAAAGGT GGTTGCTTTT
AGCGGGCGGT ACAACTTATC GGAGCCGGTT GGTGAGTTTC GCGGGTTGTT TGACGACTAT
TACGACGAGG AAATCTACTT CCACAGCCCC AACCATTTTT TGCCCAATCT GGATGATATC
GTCCTGCTCG AATCTCTCCG CCGACTTCAG ATTGTGATGA CCATTGGGGG CGAAGATCCG
TTTCTGGGCA GCAATATCAT GCTGAGTTCA GCCCTTCATG ATAAACAGAT TCCTCATGAA
CTGTACGTCT GGGAGGGCCG GGCGCATCAG GTCAGTGATT GGCAGAAAAT GGTGCAGCTT
TATTTGTGA
 
Protein sequence
MHREYHKWFS PNLNRDMELL ILGHAGARVL VFPTRRGRFY EYESFGLADT LAEKIENGWL 
QLYCVDSVDH ESVYNRSAHP HDRIRRHNQY EQYIINEVLP LSRLKNPQPF MISHGCSLGA
YHALNIAFRH PYWFGKVVAF SGRYNLSEPV GEFRGLFDDY YDEEIYFHSP NHFLPNLDDI
VLLESLRRLQ IVMTIGGEDP FLGSNIMLSS ALHDKQIPHE LYVWEGRAHQ VSDWQKMVQL
YL