Gene Slin_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0219 
Symbol 
ID8723947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp291999 
End bp292592 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385083 
Protein GI284035153 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0736207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.977558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTGGT ACGAAGACGA GATACGACAA CTCGAAACTA AACTAAGAAA CCTACCCACG 
CCCACGAACA AAGTCGTTTT TTATGGCAGT TCATCCATTC GGCTCTGGAC CACACTCGCG
CAGGATTTTC CTCAGTTAGA TACCTTGAAT TTAGGTTTTG GTGGTTCTAC ATTAGCCGCC
TGCGCCTGGT TTTTCGAACG CCTGGTCGTG CCGACAGCTC CCAAATCGTT GGTTTTCTAT
GCTGGCGACA ATGACCTCGG CGATGGTCGA CATCCGGAAG AAGTGTATCT GTTCTTTTTG
GCTTTTGCGG AGCAGATGAA GCGTTTGCTG CCGGGCGTAC CCATGGCTTT TCTATCAATT
AAGCTTAGCC CGGCCCGCTG GAACATTGCC GATCAGATAC GAACGACGAA CAAATTAATC
CAGCAGGAGT TAGAAAAAAC ACCTGATTGG CAATATGTTG ACATGACAAC GCCTTTGCTG
GGGAGCAATG GTAAACCCCG TTCAGAATTT TTTGAATCGG ATGGGCTTCA CCTGACTTCG
GCCGGTTACC GAACCTGGCA AGAGGCATTG CAGCAACAGA GCCGAATTTT TTAA
 
Protein sequence
MIWYEDEIRQ LETKLRNLPT PTNKVVFYGS SSIRLWTTLA QDFPQLDTLN LGFGGSTLAA 
CAWFFERLVV PTAPKSLVFY AGDNDLGDGR HPEEVYLFFL AFAEQMKRLL PGVPMAFLSI
KLSPARWNIA DQIRTTNKLI QQELEKTPDW QYVDMTTPLL GSNGKPRSEF FESDGLHLTS
AGYRTWQEAL QQQSRIF