Gene Slin_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0218 
Symbol 
ID8723946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp290913 
End bp291992 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content53% 
IMG OID 
Producthomoserine O-acetyltransferase 
Protein accessionYP_003385082 
Protein GI284035152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.13468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACCTTA CTTATTTCGA TTACAAATAT TCGTTCCCGC TCGAATCCGG GGAGAGCTTA 
CCGGGATTTC GGCTGGCTTA TACCACACGC GGCACCCTCA ACAGCGATCA GTCGAATGTT
GTCTGGATTT GCCATGCCCT GACCGGCAAT GCCGACGCGG GCGACTGGTG GGGCGGTATG
GTGGGTCCGG GCAAGTACTA CGATCCGGCC AATCACTTCG TTGTCTGTGC CAATGTGATT
GGGTCGTGCT ATGGATCTAC CGGTCCCTTG TCTATAAATC CGCAAACGGG GCAGCCTTTT
TATCATCATT TTCCGATGAT TACCATCCGG GACATGGTAG CGGCTCTGGA TTTACTGCGG
CAGGAACTGG GTATCGAAAA AATCCATACC TGCATTGGTG GTTCGGTTGG GGGTGAGCAG
GCGCTGGAAT GGGCCATTCT ACATCCTAGC CTTATCGAGA ATCTGGTCAT CATCGCGGCC
AGTGCCATTG CGTCGCCCTG GTGCATTGCC TTCAACGAGG CACAACGAAT GGCTATTGAA
GCCGACCCCA CCTGGCCCGA ACAGCGCGAC GATGCCGGTG TCGCCGGAAT GAAAGCAGCC
CGTGCTATGG CCATGATTTC GTACCGAAAC TACGATACCT ACGGCTTTAC GCAGGCGCTG
GATAATAATG AGCAGCTGGA TGGGTATAAA TCGGCGAGCT ATCAGCGCTA TCAGGGCGAA
AAACTGGTTG AACGATTCAA TGCCTTTACC TACTGGACGC TGTCTAAAGT AATGGATTCG
CACAATGTTG GGCGAAACCG GGGCAGTATT CTCAACGCGC TGGCTCAGGT AAAATCCCGC
ACGCTGGTCG TGGGAATTCG GTCCGATCTG CTTTTCCCTC CTTCTGAGCA GCAGTTCCTG
GCCCGACATA TTCCCGATGC CACTTACGAA GAAATTGATT CATTATATGG CCATGATGGC
TTTTTAATTG AGTTTAGACC ACTGGCGGGC ATTATCCGGA AGTGGATGGC GAGTGCCGCT
TCGGCGGGTG GGGCACCGGT AGCCAATTCG TCAACAAGTT TTAGTCAGCC GGTTAAATAA
 
Protein sequence
MDLTYFDYKY SFPLESGESL PGFRLAYTTR GTLNSDQSNV VWICHALTGN ADAGDWWGGM 
VGPGKYYDPA NHFVVCANVI GSCYGSTGPL SINPQTGQPF YHHFPMITIR DMVAALDLLR
QELGIEKIHT CIGGSVGGEQ ALEWAILHPS LIENLVIIAA SAIASPWCIA FNEAQRMAIE
ADPTWPEQRD DAGVAGMKAA RAMAMISYRN YDTYGFTQAL DNNEQLDGYK SASYQRYQGE
KLVERFNAFT YWTLSKVMDS HNVGRNRGSI LNALAQVKSR TLVVGIRSDL LFPPSEQQFL
ARHIPDATYE EIDSLYGHDG FLIEFRPLAG IIRKWMASAA SAGGAPVANS STSFSQPVK