Gene Slin_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0212 
Symbol 
ID8723940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp284927 
End bp285922 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content50% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003385076 
Protein GI284035146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.921554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.557032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGTC TGGTCGTGCC AGCGTTCAAC GAAGAAGAGA ATTTATCTGT GCTGGTACAT 
CGGTTGATGG CCGTTATGAG TCAATACGAA TGCTACGAAA TTCTGATTGT AGATGACGGT
AGCTCTGACC AGACCCGTCA TGTACTTCGG CAATTAAGCC AGGCCTATCC GGCGGTACGG
TTTATTTCCT TCTCGCGAAA TTTCGGCCAC CAAATGGCCT TGCGTGCCGG TTATGACAAT
GCCCGTGGGG AAGCCGTTAT TTGCCTGGAT GCCGACCTTC AGCACCCGCC TGAACTGATT
CCGACATTGA TCGAGAAGTG GCGTGAAGGC TATGAAGTTG TTTACACCGT TCGCCAGGCA
GATCCTAAAC TCTCGTGGTT CAAGCGGACA ACCTCGAAAT ATTTCTATCA GCTGCTGCGT
AATGTCTCCA ACCTGAAAAT TGAGGATGGT GCAGCCGATT TCCGGCTTCT TGACCGGAAA
GTGGTTGATA CCCTTAAGCA GTTTAAAGAA AACGACCTGT TTTTACGCGG AGCTATTTCG
TGGGTGGGCT TCCGGCAATG CCGTATCCTC TATGAACCGG CAGCTCGTTA TGCCGGTCGG
TCGAAGTATT CATTCCGGAA AATGCTTCAG CTGGCCGCTA TGGGCATTAC CTCCTTCTCG
ACGCGTCCGC TTTACTTATC CGTTCTGCTT GGGTTCACGA TGTTCCTGAT GGCCGGTCTG
TTTGGCGCAG AAACGCTGTA TGAGCACTTC TTTACAGATG CTACGGTTTC CGGCTGGACA
ACGCTGGTGT TGCTGATGGT ACTGATCGGG GGTGTACAGT TCATCATGAT TGGGATCATC
GGCGTATATT TGGGGAAAAC GTTCGTGGAG GTAAAAGGCC GCCCCGCCTA CATTATTGGC
GATACGAGCG AGATTGAGGA AAGCGTAACG ACATGGCAAG CCCCGGCAAA AGAACAGGAA
CAACTTCAGG AAATATATTA TTCACCGTTG ACGTAG
 
Protein sequence
MISLVVPAFN EEENLSVLVH RLMAVMSQYE CYEILIVDDG SSDQTRHVLR QLSQAYPAVR 
FISFSRNFGH QMALRAGYDN ARGEAVICLD ADLQHPPELI PTLIEKWREG YEVVYTVRQA
DPKLSWFKRT TSKYFYQLLR NVSNLKIEDG AADFRLLDRK VVDTLKQFKE NDLFLRGAIS
WVGFRQCRIL YEPAARYAGR SKYSFRKMLQ LAAMGITSFS TRPLYLSVLL GFTMFLMAGL
FGAETLYEHF FTDATVSGWT TLVLLMVLIG GVQFIMIGII GVYLGKTFVE VKGRPAYIIG
DTSEIEESVT TWQAPAKEQE QLQEIYYSPL T