Gene Slin_0207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0207 
Symbol 
ID8723935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp278659 
End bp280101 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content51% 
IMG OID 
Productamidohydrolase 
Protein accessionYP_003385071 
Protein GI284035141 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.696886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGT ATGTTAATCC AGTAGATCAT GCGGGATTAA TCAGCAATTG CCTATTATCT 
TATCAGAGAA AACTAAAATT GACTAATTCT ATGAATCGTT ATCAACTTTG CGGCCGCGTA
TTACTCTTAG GCGGATTAAC CGTTCAAACG GCCTTTGGCC AAACAGGGAC GGTGAATGCC
CGGATGGATA AAACGGCCGA AAGTCTTGAA AAAAAGGTAG TTGCCTGGCG TCGGGATTTA
CACCAGCATC CAGAGCTGGG AAACCGCGAG TTTCAGACAG CCGCTAAAAT TGCCGCACAT
CTGCAATCGT TGGGTATGGA GGTCAAAACA GGTGTTGGTA AAACCGGAGT GGTTGGCTTG
TTGAAGGGTG GCAAACCAGG CCCGGTTGTT GCCCTGCGTG CTGATATGGA TGGGCTGCCC
GTCACCGAAC GCGTTGACTT ACCGTTCAAA TCAGACGCCC GGACCGAGTA TAATGGCCAG
CAAACCGGTG TTATGCACGC CTGTGGACAT GATACACATG TGGCTATGCT CATGGGTGCT
GCCGAGGTTC TGGCATCTGT CAGGAACGAT TTGCGGGGGA CGGTTAAGTT TATCTTTCAG
CCTGCCGAAG AGGGTGCACC CGCTGGTGAA GAAGGGGGCG CCTACCTGAT GATCAAGGAA
GGCGTTCTCG AAAACCCTAA AGTCGATGCC ATTTTTGGCC TGCATATCAA TTCGCAGACC
GAAGTGGGCA CCATCAAATA CCGCCCTGGA GCGACTATGG CAGCCGTTGA TGAATATGCT
ATTAAAATTA AAGGGAAGCA AACCCACGGG GCGGCACCCT GGTCGGGCGT AGACCCGATT
GTAACGGCCG CTCAGGTGGT TATGGGCCTG CAAACGATAG TGAGTCGGAA CCTGACGCTT
ACCGATAATG CCGCCGTCGT AACAGTAGGG GCGCTTCATA GTGGAATTCG CCAGAATATT
ATTCCCGAAG ATGCCAACAT GATCGGTACG ATCCGGACGT TCAGTCCAGA AGCGCAGCAG
CTCGTACATC GGCGGATCAA TGAAATTGCA ACGAACATTG CCGAAAGTGC CGGTGCTAAA
GCCGACGTGA AAATTAATGT TATGTACCCG GTCACATACA ATGATCCCAA ACTGACCGAC
CAGATGGCCC CAACGCTCGA AGCGCTGGCT GGCAAGAATA ATGTTAAGCT GACTCCCGCA
CAAACGGGAG CCGAAGACTT CTCATTCTTC CAACAAAAAG TGCCGGGCTT TTTCTACTTC
CTCGGCGGAA TGACCAAAGG TAAAAAAGTA GAAGAGGCAG CTCCGCACCA CACTCCCGAC
TTTCAGATTG ATGAGTCTTG TTTTGTGCTG GGCATGAAAT CACTCTGCCA CCTGACGGTC
GATTATATGG AGCTTGCCAA TAAAGGTGTT GCCGTTAAAG AACTCACGGC GAGTGGTAAG
TAG
 
Protein sequence
MQKYVNPVDH AGLISNCLLS YQRKLKLTNS MNRYQLCGRV LLLGGLTVQT AFGQTGTVNA 
RMDKTAESLE KKVVAWRRDL HQHPELGNRE FQTAAKIAAH LQSLGMEVKT GVGKTGVVGL
LKGGKPGPVV ALRADMDGLP VTERVDLPFK SDARTEYNGQ QTGVMHACGH DTHVAMLMGA
AEVLASVRND LRGTVKFIFQ PAEEGAPAGE EGGAYLMIKE GVLENPKVDA IFGLHINSQT
EVGTIKYRPG ATMAAVDEYA IKIKGKQTHG AAPWSGVDPI VTAAQVVMGL QTIVSRNLTL
TDNAAVVTVG ALHSGIRQNI IPEDANMIGT IRTFSPEAQQ LVHRRINEIA TNIAESAGAK
ADVKINVMYP VTYNDPKLTD QMAPTLEALA GKNNVKLTPA QTGAEDFSFF QQKVPGFFYF
LGGMTKGKKV EEAAPHHTPD FQIDESCFVL GMKSLCHLTV DYMELANKGV AVKELTASGK