Gene Slin_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0200 
Symbol 
ID8723928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp264831 
End bp266807 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content55% 
IMG OID 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003385064 
Protein GI284035134 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.239994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCA CAACACCAAT CATGACTCCT ACCCTATTCC GCCTGTTGTT TAGCTTTTTT 
CTGACTGGCA TTCTTACTAC TGCCCAGGCG CAGTTGCCCA TCCGGAATAC CCGTTGGACT
GGTGTGGTAC TCGCCCCGAC CGATGTTCAG GTCGTGTTGA CTTTTCGTCG TGATACACTT
TTGATTACGC CCCAGCATGA AACAACTCCG CTGGAAACCA TGCGTTATGA ACAGGTGGGC
GACACACTGG CCTTGCAGAA AGTTTCGGGA GAAAGCCCCT GTGGAACGAG CGGAACGGGT
TTTTACCGAC TGATTTACAC AAACAATGGC GAAAACCTGA AACTTCTGCC CATTGGCGAT
GATTGCCGGG AACGGCAGCA TGCATTTGAG TCGAAAGCCG CATTCCGGCG GGAGCGTCTC
AACCTGGCTC AGCCGCCCCG CAACTGGCCC TACCTCGACC CCGTTCAGGA TTCCATTGCC
GGCATTAGCC TTTACCGGGC CTATGAACTC CTGAAAGGCA GGCCGTCAGT ACCGGTGATC
GTGGGCGTTC TTGATTCGGG CGTCGATATA ACCCACGAAG ACCTGCGCGA CGTGATCTGG
AAAAACCCGA AAGAGATTCC GGACAACGGG ACCGATGATG ATAAAAATGG GTACGCCGAT
GATGTGAACG GCTGGAATTT TATGGGAGCC AAAGATGGAA CAACGTCGGA ATATGACCAG
CCCGAAATCA CCCAGACGTA TATCCTGCTG AAGGCAAAAT ACGACAAAGC GGATCCGGCC
AAACTCAACC CAACCGAGAA ACGGCAATAC GAGACCTACC AAACGGCGAA GAACCAGTTC
CTGAAACGGT ATCAGGCCAG CCAGCCCAAA CGAATAGCCT TTGCCGATAC CGCCCGGTTT
TGGCAGGTAG CCAGCCAACT CCGGGAAAAG CTCCCCGACT CACAACTTAC TCCCGCCACG
GTCCGTCAGG TCGACATTGG CACGGATTCG GTAGCGCTGG CTATAAAATC CGTTCTGGCC
GATGGGTATT TGCCCCAATA CGGCTCGTTC GGAAACTACC TGAATCTGGT TCGAAAGAAC
TGGTCGCGCT TCCGGCAAAT TATGGGCAGC GAAGCCCTCA TTGCCTTCAA CCCGGATTAC
AACCCCCGTG CGGCTATCGG CGACAATCCG GCAAATCCCA CCGAACGCTA TTACGGAAGT
CCACGAATGA TTATCGGGAA ATCGCAGCAA CTGGCGGTTC ACGGGAGTCA TGTGGCGGGC
ATCATTGCTG CCCAGCGCGG TAACGGCAAG GGCATTGATG GTGTAGCCGA CAACGTCCGA
ATCATGCCCG TTTCGGTCGT ACCCGCCAAT GGCGACGAAC GGGATAAAGA TGTAGCCAAT
GGGATTCGGT ACGCGGTTGA GAACGGCGCT AAGGTGATCA ACATGAGTTT TGGCAAGCGA
CTGTCGCCGT TTAAGGAACA GGTCGATGCC GCCATTCGGT TTGCCGAAGA ACATGATGTG
CTGATCGTAC ACGCGGCCGG AAACAACGGC GAAAATTACG ACTCGCTCCC CGCCTACCCC
TCAGCCCGGT ACGAAAATGG GAAAATCGCG CAGAACGTTC TGGTTGTTGG CAATAGTACC
TGGCGTTTAA CGGATGGGCT TCCGAGCCGG TCGTCAAACT ATGGTATTCA GACGGTCGAT
CTGTTTGCGC CGGGCACCGA AATTCTGTCG ACGCTGCCCA ACAATGAGTA CGCCAGTTTC
TCGGGCACCA GCATGTCGGC CCCCATGACG GCGGGCGTAG CGGCCCTACT CCGGTCGTAC
TTCCCTAAAC TGACAGCCGT TCAGGTCAGG GAAATTCTGA TGAAGAGTAG TTATAAGCCC
GACATCCAGG TACGCAAACC CGGCCGAATT GGGCCAATCG TTCCCTTTAA TACCCTAAGC
CGTTCGGGTG GGCTGCTGAA CGCCTATAAT GCCGTGAAGA TGGGGATTGG TAAGTAG
 
Protein sequence
MNVTTPIMTP TLFRLLFSFF LTGILTTAQA QLPIRNTRWT GVVLAPTDVQ VVLTFRRDTL 
LITPQHETTP LETMRYEQVG DTLALQKVSG ESPCGTSGTG FYRLIYTNNG ENLKLLPIGD
DCRERQHAFE SKAAFRRERL NLAQPPRNWP YLDPVQDSIA GISLYRAYEL LKGRPSVPVI
VGVLDSGVDI THEDLRDVIW KNPKEIPDNG TDDDKNGYAD DVNGWNFMGA KDGTTSEYDQ
PEITQTYILL KAKYDKADPA KLNPTEKRQY ETYQTAKNQF LKRYQASQPK RIAFADTARF
WQVASQLREK LPDSQLTPAT VRQVDIGTDS VALAIKSVLA DGYLPQYGSF GNYLNLVRKN
WSRFRQIMGS EALIAFNPDY NPRAAIGDNP ANPTERYYGS PRMIIGKSQQ LAVHGSHVAG
IIAAQRGNGK GIDGVADNVR IMPVSVVPAN GDERDKDVAN GIRYAVENGA KVINMSFGKR
LSPFKEQVDA AIRFAEEHDV LIVHAAGNNG ENYDSLPAYP SARYENGKIA QNVLVVGNST
WRLTDGLPSR SSNYGIQTVD LFAPGTEILS TLPNNEYASF SGTSMSAPMT AGVAALLRSY
FPKLTAVQVR EILMKSSYKP DIQVRKPGRI GPIVPFNTLS RSGGLLNAYN AVKMGIGK