Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0192 |
Symbol | |
ID | 8723920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 257386 |
End bp | 258891 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Arginine deiminase |
Protein accession | YP_003385056 |
Protein GI | 284035126 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.172531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATG GAGAAAATAC AGCTGTTGCC GATTCGGCGA CGGCCCAACA GACTTCGCAG GCTCTCTCGA AACCACAGAT TAATGTTTCC TCAGAAATTG GTACACTCCG GCGCTTACTG ATTCATAGCC CCGATCGTGG ACTGGGTAAG GTAGTCCCCT CAAAAGCGCA GGACTGGCTT TTTGAAGACA TCGTGCATCT GGACATGATG CGCCGGGATG AATACGATTA CTACGTCAAG ATTCTGTTGT ATTTTCTGGA CCCCGACAAA GTACGGGGGA AAATAGCGGA GCTTGGCCCC GACTCCGACC GGTCGTTTTT CAAGCCCGAC CACGCCGAGT ATTTCAAGTC GGACAAAGTC ATTGATATTC AAAATCTTCT TTCCGATATT CTGGCTAATG AAGTGATCCG GACCCGGCTC ATCGCGGCCA TCTGTGGTAT CGAACGAACG TCGTTCAGAA CCCAGCAACT CCTTAGCGAA TTTGACCCCG TTGAGCTGGC GAAAATCATG ATTTCGGGCT CGCTGCCCGA CCGCCGAATG CTGTTTGCGC CACTGCCCAA CTTCATTTTC ACGCGGGACA TTGGCATCGT TATCAATGAC CATATTCTGC TCAATAAACC CGCTAAGCTG GCTCGTACGC GCGAGGCCTT GCTGGCGCAG TATATCTTCT TCAATCACCC CCTGTTTGCG GATTATCAGG ACAAAATTCT TGAAATACCG GACAACGAAC ATGCCTTCCT GCTTTCGGAT GCCGATGTAA AACGAGACAT AACGCTCTCG ACACTGGAAG GGGGCGATGT GATGATGATC GGCAAGCGCC ACCTGATGAT CGGCGTTAGC GAACGCACTA CCTTATACGC GGCTCAGCAG GTGATGCGGC TGGTCTTTAG TAAGAATGTG GTGGATACAG TTACCATTCT CCAGATTCCC AAGAAACGCG ACTACATGCA CATTGATACC GTGTTTACGC AGGTAAAACG TAATGTATGG GTGTTGCTGG GTTCACTGGC CCGCACCGGC GACGAAGCGA AAAAACGCGA TGTGATCCAC TTTTTCGCCC CCAAGGATGT ATCGGAAGAC CTGAAAATTA TGCAGTTCAT TAAAGGGCTG GAGCATAAAC CCATCGAGAT AGAAAACCTG GAAGACCTGC TGACCGACAT CAGTAAGAAT GATTTAGGGG CTACCGAACC TGTCCAGTTC ATTTATTCGG GCAACAACGA GTTTCCTTTT GGTGCGCGGG AGCAATGGAC GGACTCCTGC AATCTGCTCG CTCTGAAAGA CGGCGTGGTA GTTGGCTACG ACCGCAACGA AAAAACCGCC GAAGCATTCC GGGAGGCCGG GTTTGAAGTG ATCGGCGCGG CCAAATTACT GGACCGTTTC GAGCGGGGCG AGTCATCCCC CGAAACCATT GAAAATACGT TCATCATGCT GCCATCGGCC GAGTTGAGCC GGGCGCGGGG TGGTTCCCAT TGCATGAGCC TACCGCTGCT GCGGGATGAG GTGTAA
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Protein sequence | MKNGENTAVA DSATAQQTSQ ALSKPQINVS SEIGTLRRLL IHSPDRGLGK VVPSKAQDWL FEDIVHLDMM RRDEYDYYVK ILLYFLDPDK VRGKIAELGP DSDRSFFKPD HAEYFKSDKV IDIQNLLSDI LANEVIRTRL IAAICGIERT SFRTQQLLSE FDPVELAKIM ISGSLPDRRM LFAPLPNFIF TRDIGIVIND HILLNKPAKL ARTREALLAQ YIFFNHPLFA DYQDKILEIP DNEHAFLLSD ADVKRDITLS TLEGGDVMMI GKRHLMIGVS ERTTLYAAQQ VMRLVFSKNV VDTVTILQIP KKRDYMHIDT VFTQVKRNVW VLLGSLARTG DEAKKRDVIH FFAPKDVSED LKIMQFIKGL EHKPIEIENL EDLLTDISKN DLGATEPVQF IYSGNNEFPF GAREQWTDSC NLLALKDGVV VGYDRNEKTA EAFREAGFEV IGAAKLLDRF ERGESSPETI ENTFIMLPSA ELSRARGGSH CMSLPLLRDE V
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