Gene Slin_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0192 
Symbol 
ID8723920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp257386 
End bp258891 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content52% 
IMG OID 
ProductArginine deiminase 
Protein accessionYP_003385056 
Protein GI284035126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.172531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATG GAGAAAATAC AGCTGTTGCC GATTCGGCGA CGGCCCAACA GACTTCGCAG 
GCTCTCTCGA AACCACAGAT TAATGTTTCC TCAGAAATTG GTACACTCCG GCGCTTACTG
ATTCATAGCC CCGATCGTGG ACTGGGTAAG GTAGTCCCCT CAAAAGCGCA GGACTGGCTT
TTTGAAGACA TCGTGCATCT GGACATGATG CGCCGGGATG AATACGATTA CTACGTCAAG
ATTCTGTTGT ATTTTCTGGA CCCCGACAAA GTACGGGGGA AAATAGCGGA GCTTGGCCCC
GACTCCGACC GGTCGTTTTT CAAGCCCGAC CACGCCGAGT ATTTCAAGTC GGACAAAGTC
ATTGATATTC AAAATCTTCT TTCCGATATT CTGGCTAATG AAGTGATCCG GACCCGGCTC
ATCGCGGCCA TCTGTGGTAT CGAACGAACG TCGTTCAGAA CCCAGCAACT CCTTAGCGAA
TTTGACCCCG TTGAGCTGGC GAAAATCATG ATTTCGGGCT CGCTGCCCGA CCGCCGAATG
CTGTTTGCGC CACTGCCCAA CTTCATTTTC ACGCGGGACA TTGGCATCGT TATCAATGAC
CATATTCTGC TCAATAAACC CGCTAAGCTG GCTCGTACGC GCGAGGCCTT GCTGGCGCAG
TATATCTTCT TCAATCACCC CCTGTTTGCG GATTATCAGG ACAAAATTCT TGAAATACCG
GACAACGAAC ATGCCTTCCT GCTTTCGGAT GCCGATGTAA AACGAGACAT AACGCTCTCG
ACACTGGAAG GGGGCGATGT GATGATGATC GGCAAGCGCC ACCTGATGAT CGGCGTTAGC
GAACGCACTA CCTTATACGC GGCTCAGCAG GTGATGCGGC TGGTCTTTAG TAAGAATGTG
GTGGATACAG TTACCATTCT CCAGATTCCC AAGAAACGCG ACTACATGCA CATTGATACC
GTGTTTACGC AGGTAAAACG TAATGTATGG GTGTTGCTGG GTTCACTGGC CCGCACCGGC
GACGAAGCGA AAAAACGCGA TGTGATCCAC TTTTTCGCCC CCAAGGATGT ATCGGAAGAC
CTGAAAATTA TGCAGTTCAT TAAAGGGCTG GAGCATAAAC CCATCGAGAT AGAAAACCTG
GAAGACCTGC TGACCGACAT CAGTAAGAAT GATTTAGGGG CTACCGAACC TGTCCAGTTC
ATTTATTCGG GCAACAACGA GTTTCCTTTT GGTGCGCGGG AGCAATGGAC GGACTCCTGC
AATCTGCTCG CTCTGAAAGA CGGCGTGGTA GTTGGCTACG ACCGCAACGA AAAAACCGCC
GAAGCATTCC GGGAGGCCGG GTTTGAAGTG ATCGGCGCGG CCAAATTACT GGACCGTTTC
GAGCGGGGCG AGTCATCCCC CGAAACCATT GAAAATACGT TCATCATGCT GCCATCGGCC
GAGTTGAGCC GGGCGCGGGG TGGTTCCCAT TGCATGAGCC TACCGCTGCT GCGGGATGAG
GTGTAA
 
Protein sequence
MKNGENTAVA DSATAQQTSQ ALSKPQINVS SEIGTLRRLL IHSPDRGLGK VVPSKAQDWL 
FEDIVHLDMM RRDEYDYYVK ILLYFLDPDK VRGKIAELGP DSDRSFFKPD HAEYFKSDKV
IDIQNLLSDI LANEVIRTRL IAAICGIERT SFRTQQLLSE FDPVELAKIM ISGSLPDRRM
LFAPLPNFIF TRDIGIVIND HILLNKPAKL ARTREALLAQ YIFFNHPLFA DYQDKILEIP
DNEHAFLLSD ADVKRDITLS TLEGGDVMMI GKRHLMIGVS ERTTLYAAQQ VMRLVFSKNV
VDTVTILQIP KKRDYMHIDT VFTQVKRNVW VLLGSLARTG DEAKKRDVIH FFAPKDVSED
LKIMQFIKGL EHKPIEIENL EDLLTDISKN DLGATEPVQF IYSGNNEFPF GAREQWTDSC
NLLALKDGVV VGYDRNEKTA EAFREAGFEV IGAAKLLDRF ERGESSPETI ENTFIMLPSA
ELSRARGGSH CMSLPLLRDE V