Gene Slin_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0095 
Symbol 
ID8723823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp111967 
End bp113388 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384966 
Protein GI284035036 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCGT ACCATAGATA TATGCGCTCA CTCCTGGCTA TACTCCTGAT CTGGGGCCTC 
GGCGGGTGTA AAGATTATTT CGAACTGAAT CAGAATCCGA CGCTGATCGA CAATCCGCCA
CTAAGCGCGT TCCTCTCGAC AACGACCCAG AAAACGGCGC TTAACTCGCA GCGGATCGGT
AACATTACGT CGTACTTTGT GCAATACCTG GCGAGTCCGG GCGCTGGCGG GTCGACGGAT
ACGTACCAGA TTACGGACTA TACCAGTGCC TGGGATGCCG TTTATTTCGG TATGGCCGAT
CTGTACGACA TGAAGCGGAA AGCCCAGGAA CAGGGAGCGT CGGAATACGT TGGGGTGGCC
GATGTGCTGC TGTCGTATCA CCTTACGCTC ATTGCCGACA CGTTTGGCAG TGCGCCCTTC
TCGGATGCTT TTACCGGCAC GACACTGACG CCAAAGTACG ACACGGCCGA AACCTTGTAC
ACGACGGCGC TCAACCTGCT GAACGAAGCC ATTACAGAAC TGGCCAAAAC CGATTCGAAG
GTGAAACTTA GTGCCGCCAA CGACCTGATC CATAAAGGAA GCACGGCCGC CTGGACAAAA
ACGGCCTATG CCCTCAAGGC TCGGATGCTG AACAAAATCT CCAAAACAAG CGCTTACAAA
CCCGCCGATG TGCTCGACGC GACATCAAAA TCGTACACGG CCAACGCCGA TGATGCGCAG
ATGTCGTCGT TCTTGCTACG GAATCCATGG GCGCAGGTAG CCCGAAATAA TGCCCTTTTG
ACACTCGATG GCTGGCTGTC GACGCAGCTG GTGAATCAGC TGAATGGCAC GACATACGGC
GTTTTCGACC CACGAATTGA GAAGATCACG GATAAGACTG TTAACAACGA TTACAAGGGC
ACCGTAAATG GGCAGGGCAA CGTAGGCGGC AATAACACCA CAAAAGACGA GTCGTACATT
TCGCTCAATT CGCCCCTAAC CGGCGATGCC TCGCCGTTGT TGATCGTGAC GTTTGCGGAG
ATGAAGTTCG TGGAGGCTGA AGCGGCTCTG GCATCTGGCG ACAAGGCCCG TGCCTATGCG
GCTTATCTGG CCGGTATACG AGCTAACATG GACAAGTTGG GTGTAGCGGC CGAGGCCCGG
GATGCGTACA TTGCGAATCC GCTGGTCAGC GTGGGAGCCA ATGCCCTTAC CCGCGACCTC
ATCTTTAAAG AAAAATACGT GGTTACGTAC CTGAACCCCG AAGCCTGGAA TGATGCCCGC
CGGTACGATT ATCAGTACAA AGGCTTTAAA CTCCCCGTCA ATTCCGCTCT GCCGACGTAC
ATCCGCCGGG TCGCCTATCC GAACGGCGAA ACGACCAAAA ACGGCAAAAA CGTACCCACA
GAGGTAGCGC TGTCAGAACC ACTCTGGTGG GATAAACGAT AA
 
Protein sequence
MNSYHRYMRS LLAILLIWGL GGCKDYFELN QNPTLIDNPP LSAFLSTTTQ KTALNSQRIG 
NITSYFVQYL ASPGAGGSTD TYQITDYTSA WDAVYFGMAD LYDMKRKAQE QGASEYVGVA
DVLLSYHLTL IADTFGSAPF SDAFTGTTLT PKYDTAETLY TTALNLLNEA ITELAKTDSK
VKLSAANDLI HKGSTAAWTK TAYALKARML NKISKTSAYK PADVLDATSK SYTANADDAQ
MSSFLLRNPW AQVARNNALL TLDGWLSTQL VNQLNGTTYG VFDPRIEKIT DKTVNNDYKG
TVNGQGNVGG NNTTKDESYI SLNSPLTGDA SPLLIVTFAE MKFVEAEAAL ASGDKARAYA
AYLAGIRANM DKLGVAAEAR DAYIANPLVS VGANALTRDL IFKEKYVVTY LNPEAWNDAR
RYDYQYKGFK LPVNSALPTY IRRVAYPNGE TTKNGKNVPT EVALSEPLWW DKR