Gene Slin_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0036 
Symbol 
ID8723764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp43666 
End bp44238 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384909 
Protein GI284034979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00243745 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0775702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA AGCTATTAAC CCTGTGTTTG TCTTTAAGCA TGCTTGTGGC TATGAATGGT 
GTTGCTCAGG ACAGTAAACC AGGAAAAAGT AAGGCCAAAA AAGAAATGAG CGAAGCCGAT
GCGTCGGCGA AAGCAGCTGC CAAAGCGGAA AGTAAAGCCG CAAAAGACGC TGCCAAAGAG
GGAAAGAAAG AGGCTAAGGA AGCTAAAGCC GATGTAAACG CTACAACGGA TGCGGCAAAA
CAAGCGGCTG TAAATGACCG AATGGCGGCT GCAAGGGCTG CTAAAGCCGC CAGGAAAGCA
GCGGCTGATG GTGGTGCTGC TGCGACCGCT GCACCAGATA AGGCGGTTAA GAAAGCCGAT
AATGCTGGTT TGAAAGACGA TAAAATGAGC AAGTCGGCAA ACGCATCCAT GCCGAAAATG
AAGGAAGAGA AGGCGACCCC CGCTGATTAC AAAGCACCGG TCGATCCATC GCAGAAAGGC
CCCAACGGAG AGAAGGTAAT GACCGGACCG CGGGGTGGCA AGTATTACAT TAACAAAAAT
GGCAACAAGA CGTACCTGAG CAGTGTAAAG TAA
 
Protein sequence
MKTKLLTLCL SLSMLVAMNG VAQDSKPGKS KAKKEMSEAD ASAKAAAKAE SKAAKDAAKE 
GKKEAKEAKA DVNATTDAAK QAAVNDRMAA ARAAKAARKA AADGGAAATA APDKAVKKAD
NAGLKDDKMS KSANASMPKM KEEKATPADY KAPVDPSQKG PNGEKVMTGP RGGKYYINKN
GNKTYLSSVK