Gene Slin_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0027 
Symbol 
ID8723755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp29890 
End bp31419 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content52% 
IMG OID 
ProductEsterase/lipase-like protein 
Protein accessionYP_003384900 
Protein GI284034970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0272532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.692184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTTCGC TAGCCGGTTT AGGGCTAATT ACCCCGGTAT CAGCTCAGTC CGGAAAGTCG 
ATTCATCGGT TTGCCGATGA GGTTTTCCCG CGCTTCGATA CCCTCAACAA CGTTGTTTAC
GGACAGGCCA TCAACCTGAA AGGACAGTCT GAAACGTTGA AACTCGATCT TTTTCTGCCA
GAAAAAGGCG ATACTCTGCG TAAGCGCCCG TTGTTAATTT TTATTCATGG GGGAGGGTTC
CAGAACAACG ATAAGGTGGG TGCGTTTAGC TCGATGGTCT GTAGCAGTAT GGCTCGGCGG
GGTTACGTGG CCAGTTCCAT CAATTACCGG CTGGGACTGA CCGCATCCAA AAGTGACACG
GCCTACTTCG ATGCCTTATA CCGCGCCGTG CAGGACGCCA AAGCCGCCGT TCGGTTCTTC
CGAAAAAATG CTGATTTGTA CGGCATTGAC CCCGATCAGA TTTTCGTGAT GGGTAGTTCG
GCGGGATCAA AAACGGCGAT GCACTTAGCC TATTTAGATC AGAGTGAGGT GCCGTCCTGG
GTTGATACAA AACGGCTGGG AACGCTGGAA GGCATTAGTG GCAACCCTGG CTATTCGTCG
AAGGTGCGCG GGGTTATTAA CTGCTGGGGA GCCATGATTG ATTACCGCTG GATGCAGCCG
GGCGATGCCC CCATTTTTAA TGTACATGGC ATGGCCGATG TAACGGTGGC GTACGATTCG
TCATTCAGCT ACCACGGATT CCGACATGGC AGCACTATTC TGTACGACCA CGCCCTGAAA
ATGGGTATTC CGACGGGCCT TCAACTGTTC GAAAAAACCG GACATACGCT GGATAATGAC
AAAGTTAAAC AACAGGCTGC GCTGGGTGAA ATCAGTCACT GGCTGTTCAC CCAACTGCTA
CAGAACGAGC CGAAAAACGG GCCGGAAGTA TTCAAGTGGT CGACGGAAGT ACAGCAGTTA
ACACATCTCG ATTCAACGAC GAAAGACCCC CAAAACGCCA TTCTGTTTTC GGGCAGTTCC
TATATTCGTC GCTGGACAAC CATCGCCCGC GATCTGGCGC CTATTCCGAT TATTCACCGG
GGGTATGGTG GTGCCAAGCT CAACGATTTC GCCTATTACA TTAGCCGCAT CGTGAAGGCG
CACAGACTCA AAGCCGCCGT GTTTTACGTG GGGAATGACA TTGTTGGTGT TCTCGTCGAC
AAAACGCCGT TGCAGGTGCT GAATCTGGTT AAAAACGTTA CTCGCCAGGT GCAAGCCATT
CACCCTGACC TGCCGATTTT CTGGATTCAG GTATCGCCGA ACCCCAAGCG CTGGCCTGTA
TGGGACCAGA CCAGTGCCGC CAACGAGCTA ATCCGGCAAT ATTGTGAGCA AACGCCGAAT
CTTCATTTCA TCGAGACGGC CTATACCTTT CTGGGGCCCG ATGGCAAACC GATTCCGTCG
TTGTACGATG CTGATACCCT GCATCTGAAC GAAGCGGGGT ACAAACGCTG GGCTGTTATT
ATCAAAAAAA GCTTGATGGT GCTTAAGTAA
 
Protein sequence
MLSLAGLGLI TPVSAQSGKS IHRFADEVFP RFDTLNNVVY GQAINLKGQS ETLKLDLFLP 
EKGDTLRKRP LLIFIHGGGF QNNDKVGAFS SMVCSSMARR GYVASSINYR LGLTASKSDT
AYFDALYRAV QDAKAAVRFF RKNADLYGID PDQIFVMGSS AGSKTAMHLA YLDQSEVPSW
VDTKRLGTLE GISGNPGYSS KVRGVINCWG AMIDYRWMQP GDAPIFNVHG MADVTVAYDS
SFSYHGFRHG STILYDHALK MGIPTGLQLF EKTGHTLDND KVKQQAALGE ISHWLFTQLL
QNEPKNGPEV FKWSTEVQQL THLDSTTKDP QNAILFSGSS YIRRWTTIAR DLAPIPIIHR
GYGGAKLNDF AYYISRIVKA HRLKAAVFYV GNDIVGVLVD KTPLQVLNLV KNVTRQVQAI
HPDLPIFWIQ VSPNPKRWPV WDQTSAANEL IRQYCEQTPN LHFIETAYTF LGPDGKPIPS
LYDADTLHLN EAGYKRWAVI IKKSLMVLK