Gene Slin_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0019 
Symbol 
ID8723747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp16399 
End bp17640 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content52% 
IMG OID 
Productpeptidase M16 domain protein 
Protein accessionYP_003384892 
Protein GI284034962 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.638871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCATT ACGAAAAATT TGTGTTAGAT AATGGCCTTC AGGTATTCGT CCACGAAGAT 
GAATCGACCC CCATGGCGGC CGTTAATATA TTATATAATG TAGGCTCCCG CGACGAAGAC
CCGGCTAAAA CAGGGTTTGC TCACTTGTTT GAACACCTGA TGTTTGGCGG ATCGCGGCAC
ATTCCCAGCT ACGACGAGCC GCTGCAAAAA GTAGGTGGTG AGAACAATGC CTTCACCAGC
CCTGATATTA CCAACTATTA CATTACCCTC CCGGCGGCTA ATCTGGAAAC AGCCTTCTGG
CTCGAATCGG ACCGGATGCT GAGCCTTTCT TTCGACCCGC AGGTGCTGGA TGTGCAGCAA
AAAGTAGTCA TCGAAGAGTT CAAACAGCGG TACCTGAATC AACCCTACGG CGATGTCTGG
CTGAAACTCC GGCCACTGGC CTACCAGCAG CACCCCTATC GCTGGGCTAC CATCGGCAAG
GACATCAGTC ACATCGAAAA TGCCACGATG GACGATGTGA AGGCCTTTTT CTTCAAGTAC
TACCTGCCCA ACAACGCCAT TCTGGTCGTG GCCGGTAACG TTACCGTTGA GCAGGTGAAG
CAGCTTTGTG CCAAGTGGTT TGCGCCCATT CAGGCGGGAG ACCCTTACGT TCGGCAGCTT
CCTGTTGAGC CTACCCAAAC GATGGCCCGT AAACTGGAAA CATCGGCCAA AGTACCGCTC
AACGGTTTAT ACAAAGCTTA CCACATGCCG GGCCGATTCG ACACCGATTT CTACTCGGCA
GATTTGCTGG GCGATATCCT GGGCCGCAGC AAATCGTCCC GCCTGTACCA GCAGCTGTTA
CGGAACAACC CGGTTTTCAG CAGCATCAAT GCGTATATTA CTGGTTCCGT TGACCCCGGT
TTGCTGGTTA TTCAGGGTAA CCTCAACAAA GGTGTTTCGC TGGAAGAAGC CGATGCCGCC
GTGGAATCGG TGGTGCAGGA ATTTATCGAT CAGGTTGTAC CAGACGATGA ACTGGCCAAG
GTAAAAAATC AGGCCGAAGC TACGCTGGCA TTCTCAGAAG TAGAATTACT GAACCGCGCC
ATGAACCTGG CCTACGCAGC CAACGCGGGC AACCCCGATT TTGTGAATCA GGAAGCCGAA
CAGATTCAGG CTGTCACGCC GGACTCGATT CAGAAGATGG CTCGTCAGGT ACTGCGAAAA
GATAACTGCT CGACCCTCTA CTACCGACAG GCGGAAGCCT AA
 
Protein sequence
MIHYEKFVLD NGLQVFVHED ESTPMAAVNI LYNVGSRDED PAKTGFAHLF EHLMFGGSRH 
IPSYDEPLQK VGGENNAFTS PDITNYYITL PAANLETAFW LESDRMLSLS FDPQVLDVQQ
KVVIEEFKQR YLNQPYGDVW LKLRPLAYQQ HPYRWATIGK DISHIENATM DDVKAFFFKY
YLPNNAILVV AGNVTVEQVK QLCAKWFAPI QAGDPYVRQL PVEPTQTMAR KLETSAKVPL
NGLYKAYHMP GRFDTDFYSA DLLGDILGRS KSSRLYQQLL RNNPVFSSIN AYITGSVDPG
LLVIQGNLNK GVSLEEADAA VESVVQEFID QVVPDDELAK VKNQAEATLA FSEVELLNRA
MNLAYAANAG NPDFVNQEAE QIQAVTPDSI QKMARQVLRK DNCSTLYYRQ AEA