| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1268 |
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| Symbol | ptsP |
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| ID | 8709398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1514162 |
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| End bp | 1515820 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646483356 |
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| Product | phosphoenolpyruvate-protein phosphotransferase |
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| Protein accession | YP_003374458 |
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| Protein GI | 283783704 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0072834 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTAATCA CTGGTGTTGG CATTGGGCGC TCGATGGCAT ATGGTGAAGT ATTGTGTATG
GCACCTGCTT TGCATGAGCC AGAGGATTCT CCTCGTGCTG TTAGTGTGTT GGCTGAGGAT
GCAAAAAAGG CTGTTAAAAA TGCTTTAAAT GAAGTAAATA AAGACCTAAA CCATCGTGCA
AGTGAGGCTC TTGAAGCAAA GGATGAGGGG ACTCGAAAAG CAGCACCAAT TATGCAAGCT
CTTGCACAGA TGGCATCGGA TCCAGCGTTA ATAAGTGCAA TTGAATCTGG TATTGATAAG
GGGAAAACAG CTGAACGTGC CACTTGGGAA GGGTTCGCAC AATTTGAAGA CATGTTGCGT
AATCTTGGTG GTTACATGTC TGAGCGTGCA GGAGATTTGC ATGATGTTGG CCAGCGTGTT
ATTGCATCTT TGATTGGTGT TGAAGCTCCT GGGGTGCCGG AAAGTGATTC GCCTTTTGTG
CTGGTTGCTA GGGATCTTTC ACCTGCTGAT ACAGCTTCAC TTGATTTAAG CAAGGTTCAG
GCAATTGTCA CTCTTGATGG TGGTCCTACA AGTCACACTG CTATTCTTGC TCGTGCTCGT
GGAATTGTTG CTGTTGTTGG AGCACACGAT GCCTCTCAGC TGAAGAATCA TCAAATTGTT
GTAGTAGATG CCGTTAATGG TCATGTTATA AGCGGTCCTA GTGAAGAAGA GATCGCGCAT
GTTAAAGAGT CTCGTGAGCG TTTAAGCCGC GCTCATGAAT TGCGTGGATT GCCTGGAAGT
ACAAAAGATG GTCATTTGAT TCCTCTTTTA GCAAATGTAG GAAAGCCCTC AGATGCTGCA
ACTGCTCATG AGTATGGAGC AGAAGGAGTA GGTCTATTCC GAACGGAATT TCTGTTTATT
GGTAACGAGC AACCGCCTAG TATAGAAGAA CAAACAGAAT CTTATACAGA GTTACTATCT
CAGTTTGAAG GCAAGAAAGT TGTTATTCGA TTGCTTGATG CTGGAGCAGA TAAGCCGTTA
TCATTCTTGA CTCCTGAAGA TGAACCAAAT CCTGCTCTCG GACTTCGAGG TTTGCGTACT
CTAAGACAGC ATATGGATGT TCTAGATGGT CAGCTGGAGG CATTATCTCG TGCTGATGCT
GTGACGAATG CTGACTTATG GGTGATGGCT CCAATGGTTT CAGACGAACA TGAAGCAGCA
TATTTTGTAA AACTTGGTAA ATCTAAAGGT CTTAAAAAGG TTGGCATTAT GGCAGAGGTG
CCTTCTATCG CTCTTGTTGC CGAGGAGGTT GCTCAAGTCG CTGATTTTGT ATCTATCGGA
ACGAATGATT TGACGCAATA CACTCTTGCA GCAGATAGAA CCCTTGGGTC TGTTTCTAAT
TATCAAACTG CTTGGCACCC TGCAGTGTTG CGCGCAATCA AAATGATTGC TGATGCTGGT
AATTCACACG GCATGCCAGT CGGAGTGTGT GGAGAAGCTG CAGCAGATCC AGACTTAGCG
GTTGTTCTTA CAGGTCTCGG TGTTAACTCG CTTTCTATGA CGCCAGTTGC TTTGGACGAT
GTTCGAGCAG AACTTGCTCA AACTACATTT GATGAAGCTA AAGCTAAAGC TCATGAGGCT
TTAGCTGGAA AGTTCTACCA CTCAATCATG CAAGAATAA
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| Protein sequence | MVITGVGIGR SMAYGEVLCM APALHEPEDS PRAVSVLAED AKKAVKNALN EVNKDLNHRA
SEALEAKDEG TRKAAPIMQA LAQMASDPAL ISAIESGIDK GKTAERATWE GFAQFEDMLR
NLGGYMSERA GDLHDVGQRV IASLIGVEAP GVPESDSPFV LVARDLSPAD TASLDLSKVQ
AIVTLDGGPT SHTAILARAR GIVAVVGAHD ASQLKNHQIV VVDAVNGHVI SGPSEEEIAH
VKESRERLSR AHELRGLPGS TKDGHLIPLL ANVGKPSDAA TAHEYGAEGV GLFRTEFLFI
GNEQPPSIEE QTESYTELLS QFEGKKVVIR LLDAGADKPL SFLTPEDEPN PALGLRGLRT
LRQHMDVLDG QLEALSRADA VTNADLWVMA PMVSDEHEAA YFVKLGKSKG LKKVGIMAEV
PSIALVAEEV AQVADFVSIG TNDLTQYTLA ADRTLGSVSN YQTAWHPAVL RAIKMIADAG
NSHGMPVGVC GEAAADPDLA VVLTGLGVNS LSMTPVALDD VRAELAQTTF DEAKAKAHEA
LAGKFYHSIM QE
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