| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1230 |
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| Symbol | thrB |
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| ID | 8709499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1462429 |
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| End bp | 1463496 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646483318 |
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| Product | homoserine kinase |
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| Protein accession | YP_003374423 |
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| Protein GI | 283783669 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0083] Homoserine kinase |
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| TIGRFAM ID | [TIGR00191] homoserine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000185797 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCCAG TGTGTAACAG TGTTTCCGTG CGCGTGCCAG CGACTAGCGC AAATCTTGGT
TCTGGTTTTG ATACATCCGG TATTGCGCTT GATTATGCGG ATTCTTTAGT TTTTACTCTG
GATGATAATC ATTCTAAAAA TTCGCTTGAT TATGCTGGAA ACGTGCGCGT AATTATTCAC
GGCGAAGGCG AGGATACGCT TCCAAAAGAT GAAACGCATC TAGTTGTAGC GACTTTTCGC
AAAGCTTGCA AAATATTTGG TCTGCCAAAC TTGCGATTTA CGTTAGAAGC GCATAATCGG
ATTCCGCAAG CGCGCGGTAT GGGCTCTTCT GCAGAAGCGA TTGTTGCTGC AGTTGCTGCT
GCTTGGGCTT TTGCGCACGA AGGTGAGCTT AATCGCGAAG CAATTTTCGA AATCGCGGCC
GCAATTGAAG GTCATCCAGA CAATGTTGCT CCTGCAGTTT TTGGCGGTTT AACGATGAGC
TGGAAGCTTG ATGCTGGGGA AGGCAAAGGT TCTGTGCGCG TGGCTGGAGA TTGTGAAACT
CCGCTTTCTA CCGGTTTTCA TACTGTGCGA TACAAAGTTT CGCAAGATAT TTCCGTGTCT
GTATTTGTTC CTGATTTCGA GCTTTCTACA GAGCTTGCTA GGCGCGCGCT TCCAGCAAAA
GTGCCGTATG GTGACGCAAT ATTTAACGTG TCGCGAGTTG CAATGCTACC GGTTGCTTTT
GGTGAGTTAA ATAGCGATTC TGAAAATGAA TTAGGCACAA TAAAATCTGA TATTTCGAGA
AATGCGTTAC TTTTTGCAGC AACTCAAGAT GCTCTTCATC AACCGTATCG TGCAAATCTT
ATGAAAGATT CATGGAAGCT AGTGGAAACG TTGCGCGAGC ATGGTTTTGC TGCAGCGATT
TCGGGAGCAG GATCGTGCGT TGCTGTATTT TATGCAGGAG ACGCTGAGTG CAATAAGAGT
GCGGTTCAAA AAATCGACGC GATTGCTGAG CCGTGGCTTT CGCGTGCTGG CTGGCGTGTT
TTGCATGTGC AGGTTGATTC TATTGGCGTT GCAATAACTC GCGAATAA
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| Protein sequence | MKPVCNSVSV RVPATSANLG SGFDTSGIAL DYADSLVFTL DDNHSKNSLD YAGNVRVIIH
GEGEDTLPKD ETHLVVATFR KACKIFGLPN LRFTLEAHNR IPQARGMGSS AEAIVAAVAA
AWAFAHEGEL NREAIFEIAA AIEGHPDNVA PAVFGGLTMS WKLDAGEGKG SVRVAGDCET
PLSTGFHTVR YKVSQDISVS VFVPDFELST ELARRALPAK VPYGDAIFNV SRVAMLPVAF
GELNSDSENE LGTIKSDISR NALLFAATQD ALHQPYRANL MKDSWKLVET LREHGFAAAI
SGAGSCVAVF YAGDAECNKS AVQKIDAIAE PWLSRAGWRV LHVQVDSIGV AITRE
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