| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1180 |
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| Symbol | |
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| ID | 8709720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1383146 |
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| End bp | 1384114 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646483270 |
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| Product | glycosyltransferase, group 2 family protein |
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| Protein accession | YP_003374377 |
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| Protein GI | 283783623 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAATG CTCAAGTAGT GAATGCTAAT AAATCAAAAG ATAGCGTTAA TGTTGCGGCT
GTTGTAGTAA CTTTTAACAG GTTAGAGAAA CTAAAAACCG TATTGGCTTC GTTAGAATCT
CAAACGCGAC TTCCAAATCA ACTAATCATT GTTAACAATG CTTCAACTGA TGGCACAGAT
AAATATTTGC AAGAGTACAC TCGCGATTTT GCGAATGGTC ATTTGGGGAA TCGAGTAAAT
CTTACTGTTG TAAATTTGCC AGAAAACGTT GGCGGTGCAG GTGGCTTTAG TGCTGGTATG
CGTAAAGGCT ACGAGCTTGG CGCAGATTTC GTGTGGATTT TTGACGACGA TGGCTACCCT
CAGCCACAAG CTTTGGAAAA GCTTCTAGAT GGATTTAATG CTGCCGTAGG TGAGCTTGGT
GCGGATGTTC CGTATGCTTG CTCAATGGTT AAGTTTGTTG ATGGATCAAT ATGCGAAATG
AACAATCCAG TACCAACGTG GGATTGGGGA AGGCTTATTG CTAAAGGATT TAACAATCTC
GTTATGGTTA CAAGCTGTTC GTTTGTGTCG GTGCTTATTC CTCGTTGGGT TATAGAAAAG
TACGGATTGC CATTTAAAGA ATACTTTATT TGGTTCGATG ATGCCGAATA TACACTTCGT
ATTACGCGTG TATGCCCGGG CGTGCAGGTT CTCGATAGTG TAATTATGCA TGATATGGGA
GCAAACAAGG GTGTGAACTT TACAATGATT GACAAAAAGA ATGCTTGGAA ATTCGCATAC
GGCGTGCGTA ATCAAGCATC TTACCGTTTG CATCACGAAG GTAAGGCAAA ATACTTGCTT
TTCTGCGCAA ATGTAGTTCG TCAAATGCGA AGAGGGCATG TTGAGAGAAA GTTGCGCCGC
AAAATGATTG GTCAAATGCT AAAAGCGATT AGATTTAATC CAAAAGTTGA TTTTCCTAAA
AATAAGTAG
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| Protein sequence | MSNAQVVNAN KSKDSVNVAA VVVTFNRLEK LKTVLASLES QTRLPNQLII VNNASTDGTD
KYLQEYTRDF ANGHLGNRVN LTVVNLPENV GGAGGFSAGM RKGYELGADF VWIFDDDGYP
QPQALEKLLD GFNAAVGELG ADVPYACSMV KFVDGSICEM NNPVPTWDWG RLIAKGFNNL
VMVTSCSFVS VLIPRWVIEK YGLPFKEYFI WFDDAEYTLR ITRVCPGVQV LDSVIMHDMG
ANKGVNFTMI DKKNAWKFAY GVRNQASYRL HHEGKAKYLL FCANVVRQMR RGHVERKLRR
KMIGQMLKAI RFNPKVDFPK NK
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