| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1098 |
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| Symbol | rpsL |
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| ID | 8709431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1262042 |
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| End bp | 1262413 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646483189 |
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| Product | ribosomal protein S12 |
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| Protein accession | YP_003374299 |
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| Protein GI | 283783545 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCCTACGA TTGAACAACT TGTCCGTAAA GGACGTCAGG CCAAGCCGAA AAAGTCAAAG
ACTTTGGCCT TGAAGGGTAG CCCGCTGCGT CGTGGCGTAT GCACCCGTGT GTATACCACC
ACTCCTAAGA AGCCAAATTC CGCGCTTCGT AAGGTTGCTC GTGTGCGCCT CAGCTCTGGT
ATTGAAGTAA CCGCCTATAT TCCAGGCGAA GGTCACAACT TGCAGGAGCA CTCCATCGTG
CTCGTGCGTG GTGGCCGTGT GAAGGATCTC CCAGGTGTGC GTTACCACAT CGTGCGTGGC
GCATTAGATA CCCAGGGTGT CAAGGACCGC AAGCAGGGTC GTTCCCTGTA TGGAGCAAAG
AAGGCGAAGT AA
|
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| Protein sequence | MPTIEQLVRK GRQAKPKKSK TLALKGSPLR RGVCTRVYTT TPKKPNSALR KVARVRLSSG
IEVTAYIPGE GHNLQEHSIV LVRGGRVKDL PGVRYHIVRG ALDTQGVKDR KQGRSLYGAK
KAK
|
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