| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1083 |
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| Symbol | |
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| ID | 8709597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1240277 |
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| End bp | 1241380 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646483175 |
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| Product | glycosyltransferase, group 4 family |
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| Protein accession | YP_003374286 |
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| Protein GI | 283783532 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGTAT ACCTGTTTAT TGCAGCAATT GCAGGCGGTG CTACGTGGCT TATTATGCCG
CTTGTTCGTC ACCTTGCGAT CCGTATGGGT GCTGTTGGCA AAGTTCGCGC GCGCGATGTG
CATACTATTC CAACTCCTCG CATGGGCGGT GTGGGTATGC TTTTTGGTTT CGCGGTTGCC
ATGGCTTTCG CAAGCTCAAT GCCCTTTATT TCCGGGCTTT TTGCTGGAAC TCACCAGCCG
TGGGTGGTGC TTGCCGGAGC AGTCATGATA TGCCTGCTTG GGGTATGCGA CGATATTTGG
GATTTAGATT GGATGCTAAA GCTTGCCGGC CAGCTGCTTA TAGCCGTGTT CGTTGCGTGG
GGAGGGTTGC AAATTGTAAC CTTGCCGCTA GGCTCCCTAG TAACGGCATC TCCAAGCGTG
TCAATCGCAA TAACTGCAAT ACTAATCGTT GCTTCAATTA ATGCAGTAAA TTTTGTAGAC
GGATTAGACG GCTTGGCTTC TGGAATCGTT GCAATCGGCG GAATTGCCTT CGCAACCTAC
TCCTACATGC TCGCGCGCAC GTCGCCATCC TACGCATCAA TGGCAACTCT TATCGACGTT
GCAATGGTAG GTATGTGCGT TGGATTTATT ATGCACAATT GGCATCCAGC AAAACTTTTT
ATGGGTGACT CAGGCTCCAT GTTAATCGGC TACTTAATTA CTTGCGCGTC GATTATTATG
ACCGGCCATT TGGATCCTTC CGCCGTTCAT ACGAGTATTT ATTTGCCTGT ATTTATGCCG
ATTTTGTTGC CGATTCTTGT GCTGTTTTTG CCGGTTCTTG ACATGTGCTT GGCTATTTTT
AGGCGTGTTG CTAAAGGGCA GTCGCCAATG CATCCGGATC GCATGCACTT GCATCATCGC
ATGCTGCGCA TTGGGCATTC TGTGCAGGGT GCTGTGCTGA TTTTGTGGGG ATGGGCTGCG
CTAATTGCGT TTGGCTCTAT TATGATTTTG TTCTTTAAAG CTGTGTATGT GCTTGTTGGA
ATGATTCTTG CTGCTGCGCT ACTTACTGTG CTCACAATGA TGCCGTACTT GCGTCGTCGC
CTGCCCGAAC TTCGCAATTC GTAA
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| Protein sequence | MRVYLFIAAI AGGATWLIMP LVRHLAIRMG AVGKVRARDV HTIPTPRMGG VGMLFGFAVA
MAFASSMPFI SGLFAGTHQP WVVLAGAVMI CLLGVCDDIW DLDWMLKLAG QLLIAVFVAW
GGLQIVTLPL GSLVTASPSV SIAITAILIV ASINAVNFVD GLDGLASGIV AIGGIAFATY
SYMLARTSPS YASMATLIDV AMVGMCVGFI MHNWHPAKLF MGDSGSMLIG YLITCASIIM
TGHLDPSAVH TSIYLPVFMP ILLPILVLFL PVLDMCLAIF RRVAKGQSPM HPDRMHLHHR
MLRIGHSVQG AVLILWGWAA LIAFGSIMIL FFKAVYVLVG MILAAALLTV LTMMPYLRRR
LPELRNS
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