| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1063 |
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| Symbol | |
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| ID | 8709081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1213245 |
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| End bp | 1214012 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646483155 |
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| Product | pantothenate kinase |
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| Protein accession | YP_003374266 |
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| Protein GI | 283783512 |
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| COG category | [K] Transcription |
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| COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
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| TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.156837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTAG CAGTAGACAT TGGTAATACG AATATTGTGC TGGGTTTTTT GGAAAATAAC
CGAATTGTTG GCACTTATCG TATGACAACA AAGTCTAATC ATACATCAGA CGAGTATGGC
ATTATGATTG CGCAATTTTT GCATTTAAGC GGATTTACAA TAAACGATGT TGAAGATGTT
ATCGTTGCTT CTGTTGTGCC GAAAGTTATG CATTCATTCC GCGCTAGTAT TATCAAATTT
CTTCATATTG ATCCTATGAT TGTAGGCCCT GGTGTTAAAA CCGGTATGAA TATTCGTATT
GATGAGCCAA GAACTCTTGG CGCGGATTGT TTAGCTGATT GCGTTGGTGC GTTTAGTGAG
TATGGAGGAT CTGTACTAGT TATTGATTTT GGTACGGCAA CAACTTACAA CTATATAGAT
AAAAGTGGTG CTATTACTTG CGGACTTATT TGCACAGGTA TTCGTACTGC AGCTGCGGCA
CTTTGGGATA ACACGGCTCA GCTTCCAGAA GTGGAAATAG CTAGACCGCA GTCTGTTCTT
GCAAAATCTA CTAAACTCGC AATGCAAGCT GGATTATATT ACAGCTTCTT GGGTGGAATT
GAGCGTACAA TTGCACAGTT TAAAACTGAA ATAGACGAGC CATTTAAGGT AGTTGCTACT
GGTGGCTTGG GTAGGCTTTT TGAAAATGAC GTGCAATCGA TTGACTATTA CGATCCGGAT
CTTATTTTCA AAGGTATGGC TGAAATTTAT AAGCGCAACC TGCGGTAG
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| Protein sequence | MLLAVDIGNT NIVLGFLENN RIVGTYRMTT KSNHTSDEYG IMIAQFLHLS GFTINDVEDV
IVASVVPKVM HSFRASIIKF LHIDPMIVGP GVKTGMNIRI DEPRTLGADC LADCVGAFSE
YGGSVLVIDF GTATTYNYID KSGAITCGLI CTGIRTAAAA LWDNTAQLPE VEIARPQSVL
AKSTKLAMQA GLYYSFLGGI ERTIAQFKTE IDEPFKVVAT GGLGRLFEND VQSIDYYDPD
LIFKGMAEIY KRNLR
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