| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1034 |
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| Symbol | purD |
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| ID | 8709892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1173391 |
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| End bp | 1174662 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646483127 |
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| Product | phosphoribosylamine--glycine ligase |
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| Protein accession | YP_003374239 |
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| Protein GI | 283783485 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0151] Phosphoribosylamine-glycine ligase |
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| TIGRFAM ID | [TIGR00877] phosphoribosylamine--glycine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTT TAGTAGTTGG TTCTGGCGCT CGCGAACACG CTATTGCACA CGCGCTACTT
AAAGGAGAAA GCGTTGAAGA AGTAACTGTT GCTCCTGGAA ATCCTGGTAT TACAGCAGAT
GGCATTCAAA CTGCAAACAT AAATCAATCA GATCATGACG CTCTTATTAA GTTCGTTAAA
GACAATAACT ACGATTTTGC GTTCATCGGT CCTGAAGTTC CCCTTATGAA TGGCATTGTT
GACGATTTTG AAGCGCATGG AATTGCCGCT TTTGGTCCAA ACAAAGCCGC AGCTCAAATT
GAAGGCTCTA AAGATTTCGC AAAAAAGCTT ATGGCTCGTC ACAACGTTCC AACCGCCTCC
TACAAAACAT TTGACGCTTT GGAGACGGCA CGCGCATACG TTCTTGAGCA TGGTGCTCCA
ATTGTTATTA AAGCGGACGG TTTGGCTGCT GGAAAAGGCG TTACTGTTGC TATGGATGAG
CAAACAGCAG TTGATGCTTT GGAAGATATT TTCGTCGATC ATCGTTTTGG TCAAGCTGGA
GCAAAAGTTG TTATTGAAGA ATTTTTGCAA GGCCAAGAGT TTTCACTTAT GAGTTTCGTA
AGCGGAACTG ATTTTTGGGT TATGCCTATT TCTCAAGATC ACAAGCGTGC TTACGACGGC
GACAAAGGAC CAAATACTGG AGGCATGGGA GCTTATAGCC CTGTGCCGCA AATTAGCAAC
GAAACAGTTC AGCGTGCTAT CGACGAAATT GTGCGTCCAA CTGTCGAAGG ACTAGCTAAA
GAGGGTACGC CTTTTACCGG CGTGCTTTAT GCTGGCTTAA TTGATACAGC AACAGGTCCT
AAAGTTATTG AGTTTAATGC TCGCTTTGGA GACCCAGAAA CAGAAGTTGT GCTTCCTCGC
CTTACTTCAG ATTTTGGTGC AGCTATATGG AATATTTTGC GACATAAAAG CCCAACTTTT
ACTTGGAAAA ATAGCGGTGT TACGCTCGGC GTAATTATTG CAAGCGAAGG CTACCCTGGC
ACTTTAGTTA CTGGAACTCA ACTTCCTCAA ATTCCTGTTG ACGAAAACCA AGGTCAGCAC
GTGTATTATG CAGGAGTAAA AAGCGATGAA AAAAGCGGAA AACTTCTTAC TTCTTCAGGT
AGAGTAGCTC TTGTACAAGT GCATGGAGAC GACGTAAAAG ACGCTCAAAA CAACGTCTAC
AGCATATTAG ATAAACTTAA TCTTCCACAC ATGTTCTTTA GGCATGATAT TGCAGAAAAA
GCTTTAAAAT AG
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| Protein sequence | MKVLVVGSGA REHAIAHALL KGESVEEVTV APGNPGITAD GIQTANINQS DHDALIKFVK
DNNYDFAFIG PEVPLMNGIV DDFEAHGIAA FGPNKAAAQI EGSKDFAKKL MARHNVPTAS
YKTFDALETA RAYVLEHGAP IVIKADGLAA GKGVTVAMDE QTAVDALEDI FVDHRFGQAG
AKVVIEEFLQ GQEFSLMSFV SGTDFWVMPI SQDHKRAYDG DKGPNTGGMG AYSPVPQISN
ETVQRAIDEI VRPTVEGLAK EGTPFTGVLY AGLIDTATGP KVIEFNARFG DPETEVVLPR
LTSDFGAAIW NILRHKSPTF TWKNSGVTLG VIIASEGYPG TLVTGTQLPQ IPVDENQGQH
VYYAGVKSDE KSGKLLTSSG RVALVQVHGD DVKDAQNNVY SILDKLNLPH MFFRHDIAEK
ALK
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