| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1032 |
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| Symbol | purF |
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| ID | 8709126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1170709 |
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| End bp | 1172196 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646483125 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_003374237 |
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| Protein GI | 283783483 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAG AACTTGAAGA TATTCACGAA GAATGCGGCG TATTTGGTGT GTGGGGTCAT
CAAGATGCAG CTAGGCTGAC ATATTTTGGA CTTCATGCGC TACAGCATCG AGGACAAGAA
GGTGCCGGCA TTGTATCTAA CGACAATGGC AAACTGCATG GGTATCGCGG ATTGGGATTG
CTAACTCAAG TATTTAGCAA TGAACAAGTT ATGGATCGTC TTACTGGAAA CAGGGCTATC
GGTCACGTGC GATATGCTAC TGCAGGTTCT GGAAGCGTTG ATAACATTCA GCCTTTCCTA
TTCCGTTTCC ACGATGGAGA CGTAGCTCTT GCTCATAACG GAAATTTGAC AAATTGCACT
AGCCTACGTA ATTCCTTGGA AGATAAAGGC TCAATATTCC ACTCAAATTC TGATACTGAA
ATATTGATGC ATTTAATTCG CCACTCCAGT AAAGCAACTT TTATGGATCG CCTAAAAGAA
GCTTTACAAA CTGTTCATGG CGGTTTTGCT TACTTATTGC TTACTCAAGA TGCACTAATC
GGAGCAACTG ATCCAAATGG TTTCCGCCCT CTTTCGCTTG GTCGTATGAA GAACGGCGCG
TACGTGCTTG CTTCTGAAAC TTGTGCGCTT GATATTGTGC GAGCAGAGTT TATTCGCGAT
ATTGAGCCTG GCGAAATCAT TGTTATTAAT GACGATGGCT ACACTATTGA GCAATATACA
AAGCACGTGC AGCATGCAGT ATGCTCAATG GAATTTATTT ATTTCGCTCG CCCAGATTCT
AATATTTACG GTATTAATGT TCATTCTGTA CGAAAGCGCA TGGGTGCACG TTTGGCTAAA
GAATCTCCTG TTGAAGCAGA TATGGTTATT GGAGTTCCTA ATTCTTCACT TTCTGCTGCT
GCAGGATACG CTGAAACAAG CGGAATTCCA AACGAAATGG GATTGATTAA AAACCAGTAT
GTTGCACGCA CTTTTATTCA ACCGACGCAA GAATTACGCG AGCAAGGCGT TCGTATGAAA
CTTTCTGCTG TTCGTGGTGT AGTTGCAGGA AAACGCGTTA TCGTTATTGA CGATTCGATT
GTTCGCGGAA CTACTTCTAA GCGCATTGTG CAATTGCTTC GAGAAGCTGG CGCTAAAGAA
GTGCATATGC GTATTTCTTC CCCTCCGCTT AAATATCCTT GCTTCTACGG TATCGATATT
CAAACTACGA AGGAACTTAT TGCAGCAAAG CATTCAGTTG AAGAAATTCG CGAGTATATC
GATGCTGATT CCTTAGCATT TTTGTCTTTA GATGGATTAG TCGAGTCGAT TGGATTAAAA
AAGCCTGCTC CTTATGGCGG TTTGTGCGTT GCTTACTTTA ATGGTGACTA CCCTACTGCA
CTAGACGATT ACGGCGAAGA ATTCTTGGCT TCACTTACTC CTGAAGAACG CGAACATTTG
CAAGAAGTAA GGAAACATAG TAAATATTCG CACGAAGATC TTATATAA
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| Protein sequence | MSAELEDIHE ECGVFGVWGH QDAARLTYFG LHALQHRGQE GAGIVSNDNG KLHGYRGLGL
LTQVFSNEQV MDRLTGNRAI GHVRYATAGS GSVDNIQPFL FRFHDGDVAL AHNGNLTNCT
SLRNSLEDKG SIFHSNSDTE ILMHLIRHSS KATFMDRLKE ALQTVHGGFA YLLLTQDALI
GATDPNGFRP LSLGRMKNGA YVLASETCAL DIVRAEFIRD IEPGEIIVIN DDGYTIEQYT
KHVQHAVCSM EFIYFARPDS NIYGINVHSV RKRMGARLAK ESPVEADMVI GVPNSSLSAA
AGYAETSGIP NEMGLIKNQY VARTFIQPTQ ELREQGVRMK LSAVRGVVAG KRVIVIDDSI
VRGTTSKRIV QLLREAGAKE VHMRISSPPL KYPCFYGIDI QTTKELIAAK HSVEEIREYI
DADSLAFLSL DGLVESIGLK KPAPYGGLCV AYFNGDYPTA LDDYGEEFLA SLTPEEREHL
QEVRKHSKYS HEDLI
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