| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1030 |
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| Symbol | purC |
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| ID | 8708803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1165945 |
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| End bp | 1166727 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646483123 |
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| Product | phosphoribosylaminoimidazolesuccinocarboxamide synthase |
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| Protein accession | YP_003374235 |
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| Protein GI | 283783481 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
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| TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAAAC TTGAGAAGTT GTACGAAGGC AAAGCCAAAA AACTGTATGC TACCGATGAC
ACCAATGTGC TATGGGTTGA ATACATGAAC CAGGCAACAG CTGGTAACGG TCTGAAGAAA
GCTCAGATTG CAGGTAAAGG CAGTTTAAAT AACCGGATTA CTTCGTTACT ATTCCATTTA
CTTGAGGCGC GCGGCGTAAA AAGCCACTTC CTCGGACGAA TTTCCGATAC TGAACAACTT
GTAAAGCGTA TGCGCATGTT CCCACTGGAA ATTATTATGC GAAATACTGC TGCAGGTTCT
TTTGCAAAAC GTTATAACGT TAAAGAAGGA ACACCTTTAA AGAAGCCATT GTTGGAGTTC
TGCGTAAAGT CCGACGAGCT TGGTGATCCA TTTATCAATC CAGAAGGCGT TGTCGCTCTT
GGATTAGCAA CAGATGAAGA AATGGCGGAA GTAACTCGTC AAGCTCATGC TGTTAACAAT
GCTTTGTTGG ATATTTTCTC CAAGATTGAC GTTCAGCTTG TTGACTTCAA GATTGAAGAG
GGCGTAGACG CGCAAGGTAA TATTCTTCTC GCTGATGAAA TAACTCCTGA TACTTGCAGA
CTTTGGGATA AGCGCAATGC TGGTACGAAC GGAGTAAGTC ATTTGGACAA GGACTTGTTC
AGACGCGATT TAGGCGACAT CATTCCTGCT TATGAAGAGA TTTACGATAG GCTTGCATCT
TTAGCTCAAA GCGAAGGCTT GGATGTCTCT GTGCGCAAAC CTGACGATTG CGTAGAACGA
TAA
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| Protein sequence | MEKLEKLYEG KAKKLYATDD TNVLWVEYMN QATAGNGLKK AQIAGKGSLN NRITSLLFHL
LEARGVKSHF LGRISDTEQL VKRMRMFPLE IIMRNTAAGS FAKRYNVKEG TPLKKPLLEF
CVKSDELGDP FINPEGVVAL GLATDEEMAE VTRQAHAVNN ALLDIFSKID VQLVDFKIEE
GVDAQGNILL ADEITPDTCR LWDKRNAGTN GVSHLDKDLF RRDLGDIIPA YEEIYDRLAS
LAQSEGLDVS VRKPDDCVER
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