| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1019 |
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| Symbol | thrC |
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| ID | 8709574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1148957 |
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| End bp | 1150483 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646483112 |
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| Product | threonine synthase |
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| Protein accession | YP_003374225 |
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| Protein GI | 283783471 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0498] Threonine synthase |
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| TIGRFAM ID | [TIGR00260] threonine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAG ATACAACTAT TTTCCATAGC ACTCGTTCGC TTAAGCCAAC ATGCACATCA
AAAGAGGCAA TACGTAAAGG AATTGCTGAA GATGGCGGAT TATTTGTAGC TGATAGCCTT
GGTAGCGAAC GTTACGATAT TTCTAAATTG CAAGGCAAAT CGTATCAAGA AATTGCGCAG
GATATTTTGC AACTGTTGCT GCCTGATTAT ACTTCAGAAG AGCTTTCTTC TTGCATTAAA
CTGGCATACG GCAATCAATG GGCTAATAAC GCTATTACTC CACTTCAGCA GCTTGGAAAC
ACTAGCGATT TTGTTATGGA ACTTTTCCAT GGTCCTACTT GCGCGTTTAA AGACGTTGCT
TTGCAAATGT TGCCACAATT AATGTCTCGC ACTAAAACTC AACACGAGAA CGAATCTGAT
ATTGAAAAAA GCGTTATGAT TCTAACTGCA ACTTCTGGAG ATACAGGTAA AGCTGCTTTG
GCTGGTTTTG CTGATGTTCC AGGCACTTCT ATGGTTACTT TTTATCCAGA AGGAAAAGTT
AGCCGCGTTC AAGAATTGCA AATGACTACG CAGGTGGGCG AAAATGTGAA AGTTTGCGCA
GTTCGAGGCA ATTTTGACGA TGCTCAAACT GGCGTAAAAC AGATTTTCAC CAATAGTGAG
CTTAATAAAA ATATTGAAGA ATCTGCGAAT ACTGAATTGT CTTCTGCTAA TTCAATAAAT
GTTGGACGAC TCGTGCCGCA AGTCGTGTAC TATTTTGCGG CTTATAAGCA ACTTGTTGAG
CGTAAAGCAA TAGCTCTTGG AGACGAAATT GAGTTTTGCG TACCAACCGG CAATTTTGGC
GATATTCTTG CTGGATATTA CGCAAAAATG CTTGGTCTTC CTGTAAAACA TCTTATTGTT
GCAAGCAATA GCAATAATGT TTTGTTTGAT TTTTTGGTAA GCGGCACTTA TAACCGTCAG
CGCACATTCC ATCACACTGT TGCTCCTTCT ATGGATATTT TGGTTTCTTC TAATTTGGAA
CGAATGCTTT ATTACATGTG CGATAAAGAC ACGCGTTTAA TACAAATGCT TATGAACGAT
TTACAGCAGT GGGGCGCTTT TGAGATTCCA GAAAATGTGC TTGCAAAGAT TCGCTCACTG
TTTGGCTGCG GTTGGGCAAA TGAAGATCAA ATTCGCGAAG CTATTTATGA CTGCTGGAAC
AAGTACAAGT ATGTAATCGA CCCACATACT GCTTGCGGAT TCTTCGTTAT GCAAAATATT
CCACATGACG AAAGCACACC TAGAGTATTG CTAAGCACTG CAAGCCCATA CAAATTCCCT
CGCGTTGTTG CTGAAGCTTT GAATATTGAG CATGTGCAAG ATATGAATGA TTTCAAATGC
ATGGACGCTC TTAGTAAAGC TACAGGAACT AAAGCTCCAA GCATGCTTAG AAATCTTGAA
AATAAAACTC CACGCTTTAA TGATGTTATT AATGTTGAAG ATATGCCTGA GTATGTTTTA
GCTCAAGCGC ATAATTTCGC AAAATAA
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| Protein sequence | MAADTTIFHS TRSLKPTCTS KEAIRKGIAE DGGLFVADSL GSERYDISKL QGKSYQEIAQ
DILQLLLPDY TSEELSSCIK LAYGNQWANN AITPLQQLGN TSDFVMELFH GPTCAFKDVA
LQMLPQLMSR TKTQHENESD IEKSVMILTA TSGDTGKAAL AGFADVPGTS MVTFYPEGKV
SRVQELQMTT QVGENVKVCA VRGNFDDAQT GVKQIFTNSE LNKNIEESAN TELSSANSIN
VGRLVPQVVY YFAAYKQLVE RKAIALGDEI EFCVPTGNFG DILAGYYAKM LGLPVKHLIV
ASNSNNVLFD FLVSGTYNRQ RTFHHTVAPS MDILVSSNLE RMLYYMCDKD TRLIQMLMND
LQQWGAFEIP ENVLAKIRSL FGCGWANEDQ IREAIYDCWN KYKYVIDPHT ACGFFVMQNI
PHDESTPRVL LSTASPYKFP RVVAEALNIE HVQDMNDFKC MDALSKATGT KAPSMLRNLE
NKTPRFNDVI NVEDMPEYVL AQAHNFAK
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