Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_1011 |
Symbol | |
ID | 8709015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 1142014 |
End bp | 1142832 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646483104 |
Product | phosphoglycerate mutase family protein |
Protein accession | YP_003374218 |
Protein GI | 283783464 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGATT TCGTAGAAAA TGTTGCGAGT AACGTAAATA ATTCCATTAA TAGTGCGCAT GAAGGAATTG CTCGTTCTGT TATGCTTATT CGCCACGGTC AAACTCCGTA TAATGCACAG TTCCGTTTGC AAGGCATGAT TGATATTGCT TTGGATGAGT CTGGAATGGA TCAGGTGACT CGCTCTGGAA AAGCTTTGCG CGTGCTTTTT GGTGCTTCTG ATTTAGAAGA TCCAAAGGAC CCGAACAGCA CTGAACACGT GCGCATTACG CCAGAAGAAG CGGACGCGAG TTTTGTGGCG ATTGTTTCTC CACTTATTCG CGCTCAACAG ACTGCTCATG CTTTTGCAGA TAAGATTGGG CTTCATGTGC ATGTTGAAAA TGGTGTGCGC GAGCGTTTCT TTGGCGAGTG GGAAGGTTTG AATCGTCAGC AGATTAGCGA GCAGTGGCCG GAAGATTTCA AAGCTTGGGT TGAAGGTAAA AGCGGAGAGC TTCGTCATGG TGCTGAAGCT AAGCAGGAAG TAGGAGAGCG CGCTGCTGCT GCAGTAGAAG ATTGGGCTCG CAAAACTGGC GCAGACCGTG ATTTGCTAGT ATTTTCGCAT GGTTCCTGTC TTTCGCAAAC TGTTCATAAG CTGCTTGGAT TAGATAAAGT AGATCCTTCT TACAAGACGA TTGGCGGCAT GGGAAACGGT CGTTGGGCGC GCTTAATTCC AAGTCTTAAC GCTGAGGGTT CGATTCATTG GCGTTTGGAT GCTTATGATC AAGGTCCTGC AGCTGACCCT ACAAGCCAGC GTCTTATTCG CATTTGGGGT GCTGCGTAA
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Protein sequence | MVDFVENVAS NVNNSINSAH EGIARSVMLI RHGQTPYNAQ FRLQGMIDIA LDESGMDQVT RSGKALRVLF GASDLEDPKD PNSTEHVRIT PEEADASFVA IVSPLIRAQQ TAHAFADKIG LHVHVENGVR ERFFGEWEGL NRQQISEQWP EDFKAWVEGK SGELRHGAEA KQEVGERAAA AVEDWARKTG ADRDLLVFSH GSCLSQTVHK LLGLDKVDPS YKTIGGMGNG RWARLIPSLN AEGSIHWRLD AYDQGPAADP TSQRLIRIWG AA
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