| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0908 |
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| Symbol | pgk |
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| ID | 8709067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1035703 |
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| End bp | 1036908 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646483006 |
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| Product | phosphoglycerate kinase |
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| Protein accession | YP_003374122 |
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| Protein GI | 283783368 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0126] 3-phosphoglycerate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAC TGAAAGATTT GGGAGATTTG AGTGGTAAGC GCGTATTGGT TCGCGCTGAT
TTTAACGTTC CTCTCAAGGG TACGACGATT ACTGATGATG GTCGTATTCG TGCTGCTTTA
CCAACCATTA AGGCTTTGCG TGAGCAGGGT GCTAAGGTGA TTTTGATGGC TCACCTTGGT
CGTCCAAAGG GTCAGGTTGT TCCAGAGCTT TCCTTGGCTC CAGTTGCGCA GCGTTTGGGT
GAATTGCTCG GCACAAATGT TGTTTTGGCT GCAGACACTT ACGGCGAAGA TGCTCAAGCT
AAGGTAGCTG CCATGAATAA TGGCGACGTT GTTTTGCTTG AAAATGTGCG CTTCAACGCG
GAAGAAACCA GCAAGGATGC TTCCGAGCGC GCAGCTTACG CTAAGAAGAT TGCTTCTCTT
GGCGAAGTGT TTGTTTCCGA CGGCTTTGGT GTTGTGCACC GCGCTCAGGG TTCAAATTAC
GATGTTGCTG CCGATCTTCC AGCAGCTGCA GGCTTGCTTG TTGAAAAGGA AGTTAAGGCA
CTTTCTCGCG CAACTGAAAA CCCAGAGCGT CCTTTGACTG TTGTTCTCGG CGGCTCTAAG
GTTTCCGACA AGCTCGGCGT TATTGAAAAC TTGCTTTCTA AGGCTGATCG TCTTGTTATT
GGCGGCGGTA TGGTGTTCAC ATTCCTCAAG GCTTTGGGTC ACGAAGTTGG TACTTCTTTG
CTTGAAGAGG ATCAACTCGA GAAGGTTAAG GGATACATTG AAACCGCTAA GAAGAATGGC
GTTGAGCTTG TGCTTCCAAC TGATATTGTT GTGAATGCTG GCTTCCCAGC AGGGGATACT
CCAGTTGTTC CAGAAGTAGT TCCAGCAGAC GCTATTCCTG CAGACAAGAT GGGCTTGGAT
ATTGGTTCTG ACTCTCAGAA GCTTTTCCAC GACAAGATTG TTGACTCCAA GACTGTTGTT
TGGAACGGTC CTATGGGTGT GTTCGAGGTT CCAGAGTTTG CAGCCGGTAC TCGCGCTGTA
GCTCAGGGCT TGGTCGATGC AACTAAGAAC GGCACTTTCA CTATAGTCGG CGGTGGTGAT
TCTGCTTCTG CAGTGCGCAA CCTTGGATTC CCAGAAGATG GCTTCTCGCA CATTTCTACT
GGCGGCGGCG CTTCTCTCGA GTTCTTGGAA GGCAAGACTC TTCCAGGTTT GAGTGTGCTT
GAGTAA
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| Protein sequence | MKTLKDLGDL SGKRVLVRAD FNVPLKGTTI TDDGRIRAAL PTIKALREQG AKVILMAHLG
RPKGQVVPEL SLAPVAQRLG ELLGTNVVLA ADTYGEDAQA KVAAMNNGDV VLLENVRFNA
EETSKDASER AAYAKKIASL GEVFVSDGFG VVHRAQGSNY DVAADLPAAA GLLVEKEVKA
LSRATENPER PLTVVLGGSK VSDKLGVIEN LLSKADRLVI GGGMVFTFLK ALGHEVGTSL
LEEDQLEKVK GYIETAKKNG VELVLPTDIV VNAGFPAGDT PVVPEVVPAD AIPADKMGLD
IGSDSQKLFH DKIVDSKTVV WNGPMGVFEV PEFAAGTRAV AQGLVDATKN GTFTIVGGGD
SASAVRNLGF PEDGFSHIST GGGASLEFLE GKTLPGLSVL E
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