| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0907 |
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| Symbol | tpiA |
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| ID | 8709123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1034741 |
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| End bp | 1035538 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646483005 |
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| Product | triose-phosphate isomerase |
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| Protein accession | YP_003374121 |
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| Protein GI | 283783367 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGTTA AAAGAAAGCC GCTAGTCGCA GGTAATTGGA AAATGAACTT CAATCACCGC
GAAGCAACGC ATTTTATACA AAAATTTGCG TGGCTACTGC GTGACGCGCA TTACGACTAT
CACGATTGTG AAATTGCACT TATGCCTTCT TTTACTTCAA TAAGAAGCGT GCAAGTTCTT
GTTGAGTCTG ACCATTTGCC AATATTGTAC GGAGCTCAAG CTGTTTCTGT TACTGCTCAA
GGTGCTTTTA CTGGTGATGT TTCTGCAGAT ATGCTTGCAA GTCTTGGATG TTCAATGGTT
ATTGTTGGTC ATTCTGAAAG ACGCAAGTAT CATCCTGAAG ATGATGCAAA TATAGTTGAT
CAAGTTCGAG CTGTTCTTGC CGCAGGAATG CAGCCAATTC TTTGCGTTGG TGAAAGTCTT
AAAGAACGTC AACAGGGTGT TGCGCTGGAT TTTGCTGTAG GGCAAGTGCA TGATGTAACG
CGCGATTTGG ATGCGAAGCA AGCTAAGCGT TTAATTATTG CGTACGAGCC AGTTTGGGCA
ATTGGTACGG GTATGGTTGC CACTGCTAAC TCAGCTCAGG AAGCTGCATT GGCTATTCGT
GAAGACTTGC GCGTTACGTT CGGTGACGAT GTTGCAGATA CTGTTCGTAT TCTTTACGGC
GGATCTGTAA CTTCTTCTAA TGCTTCAAGT CTTATTGCTG AGCCTGATGT TGACGGATTT
TTGGTTGGTG GAGCTTCTTT GGATGCAGAG GAGTTGTCGA ATATTGTGCG ACTCACCGCA
GCACAATCGC GTCTATAG
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| Protein sequence | MVVKRKPLVA GNWKMNFNHR EATHFIQKFA WLLRDAHYDY HDCEIALMPS FTSIRSVQVL
VESDHLPILY GAQAVSVTAQ GAFTGDVSAD MLASLGCSMV IVGHSERRKY HPEDDANIVD
QVRAVLAAGM QPILCVGESL KERQQGVALD FAVGQVHDVT RDLDAKQAKR LIIAYEPVWA
IGTGMVATAN SAQEAALAIR EDLRVTFGDD VADTVRILYG GSVTSSNASS LIAEPDVDGF
LVGGASLDAE ELSNIVRLTA AQSRL
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