| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0821 |
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| Symbol | |
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| ID | 8708817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 930220 |
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| End bp | 931254 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482922 |
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| Product | glycosyltransferase, group 2 family protein |
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| Protein accession | YP_003374039 |
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| Protein GI | 283783285 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATA CGAGTGCATC AAAAAAAATT ACTACTAATA ACGCAACTAG CATTGATAAA
TTAGCTATTG TTGTTGTCAC TTATAAGCGT CAAGAGCTTT TGGAGAATTT ATTCCATTCG
TTTGAATGTT TAAAAGAATG CCCTTGGCGT ATTGTCGTTG TTGACAATGA GTGCAGTGAC
AAAACCGGCG AAATGGTTGC TTGTCTTGAA GCTTCTTTAA CTAATCGTTG GGGTAAAGCT
CAAAAAGATT GTGAAGGCAA TGAACTTCAT GTTGTGTATG CTCCTCAAGA TGAAAATCTT
GGTGGTGCTG GCGGTTTTAG TGCTGGTGTT AAAAAAGCTT ATGAACTTGG AGCTAAGTGG
TTCTGGGTTA TGGATGACGA TGTTGAAACA GTGCCTGAAT CTATTGAGCG TCTTGCTCCT
TGGACTAAGC GTCATGCTGT TGTTCAAGGA AGTCGTTTAG ATTATGACGG TGGTAAATTC
TACTGGCAGT ACGATTTTTT GGTTCCGCTT GGTATTCCAA ATCCTATTGC GCCTGCTGCT
TTCGGCAGAG CTGGATACAA AGTTATGAAT ACGATGTGTT TTGAGGGCGG TTTGATTCGT
CGAGATATAG TTGAAAAAAT CGGCTTCCCG GATTCGCGCT ACTTTATTTA CTGGGATGAT
ACTACTTACG GGTATCTTGC GAGTAAGGTT ACGAATCCTA TTGTTGTTCC GGATATTATT
CTTCGTCGCA CTCGTGATAT TCCTAATTGG GATATTGCAG GAGTGCGTCA GCTAAATTCA
ACATCGGACA TGAATCGTTA TCATATTATG CGAAATAGAG GCTTTATGGC TCGCTACTTT
ATGGTTCATG GCGATTTTCG TCCGTTTATG TTTGCGCTTG GAACTGCTTT AACAGCTGCT
AAAGAGCTTA TTCGTTTGAT AGCTGTCGAT CGTGAGCATA TTATTTCGGG TATTGGTAAA
TTGTTTACCG GTTGGATTGA TTCTCGAAAA ATTTTGCACG ATCAAGACTG GAAACCTATG
CCTTCGTTGA AGTAG
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| Protein sequence | MSNTSASKKI TTNNATSIDK LAIVVVTYKR QELLENLFHS FECLKECPWR IVVVDNECSD
KTGEMVACLE ASLTNRWGKA QKDCEGNELH VVYAPQDENL GGAGGFSAGV KKAYELGAKW
FWVMDDDVET VPESIERLAP WTKRHAVVQG SRLDYDGGKF YWQYDFLVPL GIPNPIAPAA
FGRAGYKVMN TMCFEGGLIR RDIVEKIGFP DSRYFIYWDD TTYGYLASKV TNPIVVPDII
LRRTRDIPNW DIAGVRQLNS TSDMNRYHIM RNRGFMARYF MVHGDFRPFM FALGTALTAA
KELIRLIAVD REHIISGIGK LFTGWIDSRK ILHDQDWKPM PSLK
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