| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0646 |
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| Symbol | |
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| ID | 8709884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 724403 |
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| End bp | 725785 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646482752 |
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| Product | hydrolase, alpha/beta domain protein |
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| Protein accession | YP_003373876 |
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| Protein GI | 283783122 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.291247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGC TTACAAGCTA TTATGTTCCG GGATTGCATA TTGAAGAACG AGCGATTGAT
GTGCCGCTTG ATTGGGAGGG TAACACTCCG GGTGGTGCTA TCAAAGGTGA GACTATTCGC
TTATTCTGCA GAGTAGTTTG CGCTCCTGAG CATGTGCATG ACGATTTGCC GCTGCTTGTG
TTCTTGCAAG GAGGCCCAGG CGGGCAGTGC CCACGTCCGC TTTCACCTTC TAGCGATGGT
TGGATTCAAG AGGCTATTAA GCATTTTCGC GTAGTTTTGC CGGATCAGCG CGGTGTTGGA
CGTTCCTCAA GGGTAGATGC TTCAACCATG AAGCGTATGT TGGATGACGG CGTTAGTGTT
GAGCGTCAAG CATGGTATTT GAAGCGTTTC TTAGCTGATT CAATTATTCG CGATTTTGAG
CATTTGCGAC TTACTGAGTT TGATGCGAAG CCGTGGGTTT CTTTAGGGCA AAGTTATGGC
GGATTCTTAA CGCTTACTTA TTTGTCGCTT TCCCCGCAAG GATTAATTGC AAGCTTCACA
ACCGGCGGTA TTCCTCATGT TCCGGCGAAT GCGCGTGAAG TTTACGAACA CACGTTCCCG
CGTATGGCTC GCAAAACAGA GCAATTCTAT GAGCGTTATC CGCAGGATGT GGCTCGCGCC
GCTGCTATTG CAGACCGTAT TGCTCAAGGA GACGTTATGC TTCCAAATGG CGAAAAACTT
ACGGTTGAAC GATTCCAAAT GTTGGGCTCT TCCTTTGGTA TGAAACCAAG TTTTGAGCGA
GTGCACTGGC TTCTTGATTC CGCTTTTTCT GACGGTGACG GTTCGCTTAA AGCTTTCAAA
CACGCTGGCG GTTCTGTTGC TGGTAGTTTA AGCGACGAGT TTGTTTACGG TGTAATGGAT
GCTACTGCTT CGAGCCCGCT GTACTGGCCG TTGCAAGAGT TTATTTATGC TGATGGCGAA
TTAGAGCATC CAATTTTGTG GGCTGCCCAG CAGGTTAGGG AAACAATGCC AGAGTTTTCT
GGTTCTGCAC GTCCGCTTCT TTTTACGGGC GAAGCTATGT TTCCTTGGAT GTTTGATCAA
GAAAAAGCTT TGCAGCCATT CTTGCCAGCA GTTGACTGCT TAATGAGCGA CAAGCAGTTT
GGCAAGATTT ATGATCAAGA GCAGCTTGCT AATAATGAAG TTCCACTACA GTCTGCAGTC
TACTTTGATG ACATGTATGT TGATTCTGGT CTTCAGTTAG ATACGCTTTC TCGTATTGCA
AACTCCCATT ATTGGACAAC GAATGAGTTT GAGCATGATG GTTTGCATGG AGATGTAGTA
TTCCGTCATC TATTTGATGA GGCTTTAAAT CGCGGTGATT TAGAGGGAAT TTACAAGAGA
TAA
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| Protein sequence | MALLTSYYVP GLHIEERAID VPLDWEGNTP GGAIKGETIR LFCRVVCAPE HVHDDLPLLV
FLQGGPGGQC PRPLSPSSDG WIQEAIKHFR VVLPDQRGVG RSSRVDASTM KRMLDDGVSV
ERQAWYLKRF LADSIIRDFE HLRLTEFDAK PWVSLGQSYG GFLTLTYLSL SPQGLIASFT
TGGIPHVPAN AREVYEHTFP RMARKTEQFY ERYPQDVARA AAIADRIAQG DVMLPNGEKL
TVERFQMLGS SFGMKPSFER VHWLLDSAFS DGDGSLKAFK HAGGSVAGSL SDEFVYGVMD
ATASSPLYWP LQEFIYADGE LEHPILWAAQ QVRETMPEFS GSARPLLFTG EAMFPWMFDQ
EKALQPFLPA VDCLMSDKQF GKIYDQEQLA NNEVPLQSAV YFDDMYVDSG LQLDTLSRIA
NSHYWTTNEF EHDGLHGDVV FRHLFDEALN RGDLEGIYKR
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