| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0625 |
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| Symbol | xfp |
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| ID | 8710001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 694637 |
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| End bp | 697132 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 646482734 |
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| Product | D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase |
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| Protein accession | YP_003373859 |
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| Protein GI | 283783105 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3957] Phosphoketolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTACAG GAGTACACAT GACGAGTCCT GTTATTGGCA CACCTTGGAA GAAGCTCAAC
GCTCCAGTTT CCGAGGCAGC TATCGAAGGC GTAGACAAGT ACTGGCGCGT TGCCAACTAT
CTTGCAATTG GCCAAATTTA TCTTCGCAGC AACCCTCTAA TGAAGGAGCC GTTCACTCGC
GAAGACGTTA AGCATCGTCT GGTGGGCCAC TGGGGCACCA CTCCAGGTCT TAACTTCCTT
ATCGGCCACA TCAATCGTTT TATCGCTGAT CACCAGCAGA ACACCGTGAT TATCATGGGT
CCGGGTCACG GCGGCCCAGC TGGTACTGCT CAGTCTTACC TCGACGGTAC TTACACTGAG
TACTATCCAA AGATTACAAA GGACGAAGCT GGTTTGCAGA AGTTCTTCCG CCAGTTCTCT
TACCCGGGCG GTATTCCTTC TCACTTCGCT CCTGAAACCC CAGGCTCCAT CCACGAAGGT
GGCGAGCTTG GTTATGCACT CTCCCACGCT TACGGCGCTG TTATGAACAA CCCAAGCTTG
TTCGTTCCAG CAATCGTTGG CGATGGTGAA GCTGAGACCG GTCCTTTGGC TACCGGTTGG
CAGTCCAACA AGCTTGTGAA CCCACGTACC GATGGTATCG TGCTTCCAAT CTTGCACTTG
AATGGCTATA AGATCGCTAA CCCAACAATT CTTTCCCGTA TTTCCGATGA AGAGCTTCAT
GAGTTCTTCC ATGGCATGGG TTACGAACCA TACGAGTTCG TTGCTGGCTT CGACGATGAG
GATCATATGT CCATCCACCG TCGCTTCGCT GACATGTTCG AAACTATCTT CGATGAAATT
TGCGATATTA AGGCTGAGGC TCAAACTAAC GATGTAACTC GTCCTTACTA CCCAATGATT
ATCTTCCGCA CTCCAAAGGG TTGGACTTGC CCGAAGTTCA TCGATGGCAA GAAGACCGAA
GGTTCTTGGC GTGCACACCA GGTGCCACTG GCATCTGCTC GCGATACCGA AGCTCACTTC
GAGGTTTTGA AGAACTGGAT GAAGTCCTAC AAGCCTGAAG AGCTCTTCGA TGAAAAGGGC
GCTGTGAAGG AAGACGTTCT TTCCTTCATG CCAAAGGGCG AACTCCGTAT TGGCGAAAAT
CCAAACGCCA ACGGTGGTCG TATTCGTGAA GATTTGAAGC TTCCAAAACT CGATGATTAC
GAAGTCAAGG AAGTTAAGGA ATTCGGTCAC GGCTGGGGTC AGCTCGAAGC TACCCGTCGC
CTTGGTGTTT ACACTCGTGA CATCATCAAG AACAACCCAG ATTCCTTCCG TATCTTCGGC
CCAGATGAGA CCGCTTCCAA CCGTTTGCAG GCTGCTTACG AAGTAACCAA CAAGCAGTGG
GATGCTGGCT ATCTCTCCGG CTTAGTCGAT GAGCACATGG CTGTTACCGG CCAGGTCACC
GAGCAGCTTT CCGAGCACCA GATGGAAGGC TTCCTCGAGG GTTACTTGCT CACCGGCCGT
CACGGCATCT GGAGCTCTTA CGAGTCCTTC GTACACGTTA TCGACTCCAT GTTGAACCAG
CACGCAAAGT GGCTTGAGGC TACCGTTCGC GAGATTCCAT GGCGTAAGCC AATCTCCTCC
GTGAACTTGT TGGTATCCTC TCACGTATGG CGTCAGGATC ACAACGGCTT CTCGCACCAG
GATCCAGGCG TAACCTCCGT GCTCTTGAAC AAGACCTTCA ACAACGATCA TGTAATCGGC
ATCTACTTCC CAGTAGATTC CAACATGTTG CTCGCTGTTG CTGAAAAGGC TTACAAGTCC
ACCAACATGA TTAACGCAAT CTTCGCTGGT AAGCAGCCAG CCGCCACTTG GTTGACTCTC
GACGAAGCTC GCGAAGAGCT CGAGAAGGGT GCTGCAGAGT GGAAGTGGGC TTCCAATGCT
AAGAACAATG ACGAAGTTCA GGTTGTTCTC GCTGGTGTTG GCGATGTTCC ACAGCAGGAA
TTGATGGCAG CTGCCGACAA GTTGAACAAG CTTGGCGTTA AGTTCAAGGT TGTTAACGTT
GTTGACTTGC TCAAGTTGCA GTCCGCTAAG GAAAACAACG AAGCTTTGAC TGACGAAGAG
TTCACTGAGC TCTTCACTGC TGACAAGCCA GTCCTCTTCG CTTATCACTC CTATGCACAT
GACGTTCGCG GCTTGATTTA CGATCGTCCA AACCACGACA ACTTCAACGT TCATGGCTAC
AAGGAGCAGG GCTCCACCAC AACGCCATAC GATATGGTTC GCGTGAATGA CATGGATCGT
TACGAGCTTA CCGCTGAAGC ATTGCGCATG GTTGACGCAG CTAAGTATGC CGACGAAATC
AAGGAGCTCG AGGACTTCCG TCTCGAAGCC TTCCAGTATG CAGTCGACAA GGGTCTTGAT
CACCCAGACT ACACCGATTG GGTATGGCCA GGCGTTAAGA CCGACAAGCC AGGTGCTGTC
ACCGCTACCG CTGCAACCGC AGGCGATAAC GAGTAG
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| Protein sequence | MSTGVHMTSP VIGTPWKKLN APVSEAAIEG VDKYWRVANY LAIGQIYLRS NPLMKEPFTR
EDVKHRLVGH WGTTPGLNFL IGHINRFIAD HQQNTVIIMG PGHGGPAGTA QSYLDGTYTE
YYPKITKDEA GLQKFFRQFS YPGGIPSHFA PETPGSIHEG GELGYALSHA YGAVMNNPSL
FVPAIVGDGE AETGPLATGW QSNKLVNPRT DGIVLPILHL NGYKIANPTI LSRISDEELH
EFFHGMGYEP YEFVAGFDDE DHMSIHRRFA DMFETIFDEI CDIKAEAQTN DVTRPYYPMI
IFRTPKGWTC PKFIDGKKTE GSWRAHQVPL ASARDTEAHF EVLKNWMKSY KPEELFDEKG
AVKEDVLSFM PKGELRIGEN PNANGGRIRE DLKLPKLDDY EVKEVKEFGH GWGQLEATRR
LGVYTRDIIK NNPDSFRIFG PDETASNRLQ AAYEVTNKQW DAGYLSGLVD EHMAVTGQVT
EQLSEHQMEG FLEGYLLTGR HGIWSSYESF VHVIDSMLNQ HAKWLEATVR EIPWRKPISS
VNLLVSSHVW RQDHNGFSHQ DPGVTSVLLN KTFNNDHVIG IYFPVDSNML LAVAEKAYKS
TNMINAIFAG KQPAATWLTL DEAREELEKG AAEWKWASNA KNNDEVQVVL AGVGDVPQQE
LMAAADKLNK LGVKFKVVNV VDLLKLQSAK ENNEALTDEE FTELFTADKP VLFAYHSYAH
DVRGLIYDRP NHDNFNVHGY KEQGSTTTPY DMVRVNDMDR YELTAEALRM VDAAKYADEI
KELEDFRLEA FQYAVDKGLD HPDYTDWVWP GVKTDKPGAV TATAATAGDN E
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