| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0587 |
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| Symbol | |
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| ID | 8708805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 639129 |
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| End bp | 640952 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 646482696 |
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| Product | FtsK/SpoIIIE family protein |
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| Protein accession | YP_003373823 |
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| Protein GI | 283783069 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.58399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATGGA TGCAAGATAA TTGGATGATG CTAACCATGA TTATTCCAAG CATTATGATG
TACATAGCAA GTCTTATTCC ACAAATTTTT CAATACATAT CTGAGAAAAA TTCTGTTCAA
AATGTTCAAC AAAATCAGCA AATTCAATTA TTAAACACTA CGCAATCGTC AAATAACGTA
ACTTATAATC AACAAACTGT AGAAAGTTTG CCAGATACTA TTACACCAGT AAGTTTAGAA
ACATTACTTA TGAGAAGAAA TGCAATTTCT AATACGCAAC ATCACTGGAA AGAAGTATTG
CAAACATGGT TAAAAAATGC AGGAACATAC GACATAAAAA ACAAATCCAA TAGTATGAAG
GAAAATCTAA ATACAAATAT TTATAACTAC TTGCCTAATT CAAAAACTAA ACACCTTATA
GCTCCACTTG GAATAAGTAA TAATGGCTAC TGCTATTTAG ATTTAATTAA CAATGGGCCA
CATGCTTTAG TTGCTGGAAC AACTGGTTCT GGTAAATCAG TACTTCTTAC GACTTGGTGT
TTAGCTTTGG CTTTTCAATA CGGTCCGCAG CAGCTACGGT TTGTTTTTAT GGATTTTAAA
GGAGGAGCAA CTTTTGACAT ACTATCTAAA CTCCCACATA CTATGGGAAA CGTAGGAGAT
CTAAATCTTA AACACGCAAT ACGCGCTCTA AAAGGTCTCG AACTAGAACT AAATAGACGA
GAAAGACTAG TAGCTCATCA TGGATGTAAT AATATTGCAC AAGTAACCCC AGCTGAACCT
TCATTGCTTA TTGTTATTGA CGAATTTCAT GCTCTAAAAG ATCAACTTCC CGACTACATG
CCTCGTCTTA TACGAATTGC ATCAGTAGGC AGATCTTTGG GAATGCATAT TATTGCTGGA
ACTCAAAATC CACTCGCACA AGTAAGCGCA GATATGAAAG CTAATATTTC TATTAATATT
TGCTTGAGAG TTAGAGACGG AATGCAATCG CAAGAATTAT TAGGAACAGC GCATGCAGCT
AGAATAAGCC CAAATACGCC AGGAGCCGCA TATTACAATA TTGGAGAAGG AGTAGAAGCT
TTGCGATGTG CTCAAAGCAG CAATCCTGCA CATTTAGTAC GAGCAATACA GTTAGCTGGT
AGATTCTGCC ATCATGATCA TTCTCCAGAA TTATTTAGCA AACCATTGCC GTCGATTCTT
TCAGCAAAAC AACTTGCAGA GTATTCAAAT AATTACAAAT ACAAAAATTC GGAGCAAAAA
ATATCTCAAA GTTTACGTAC TCAAGAATTT TATACGAAGC ATATTATTAT TGGGTTGCAA
GACGATACCA TACACTTATA TCCTGCTCTA TTACCAATTC ACCTTGGAAA TATAGCTGTT
ATTGGTAGTA GGAAACAAGG CAAAACAACA ATATTAAAAA TAATTTCTAA AACTTTAAAC
CTGCCAATAT ATTCAGGAAA ATCACTATAT GAACAAAACA TTAATAACAT TTACAACGAA
AATACGCCAA TCATTATTGA CGATGCAGAT GAATTGCTTG ATCCGCTAAA TACTAAACAA
ACTGCTATTG CTTTTCAAAA AAGATTAAAT AGTAAACAAT GCCCAGTTAT TATGAGCACT
AGCACTTCTC GCTACTTACG TTTACCTGAG CAAGCACCAG TAAGGATAAT ATTTCCAACA
GGAGATGTGG GCACAGATAC AATGCTTGGA ATACCTTCTG CTTTATCTAA AAGTTTTGAT
ATTGAAGACT ATCAACTTCC AGGACGATGC GTTTTAATCA CTCCAGGATC AGCAAGTTTA
ACTCAAATAG TGCACCTAGA ATAA
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| Protein sequence | MAWMQDNWMM LTMIIPSIMM YIASLIPQIF QYISEKNSVQ NVQQNQQIQL LNTTQSSNNV
TYNQQTVESL PDTITPVSLE TLLMRRNAIS NTQHHWKEVL QTWLKNAGTY DIKNKSNSMK
ENLNTNIYNY LPNSKTKHLI APLGISNNGY CYLDLINNGP HALVAGTTGS GKSVLLTTWC
LALAFQYGPQ QLRFVFMDFK GGATFDILSK LPHTMGNVGD LNLKHAIRAL KGLELELNRR
ERLVAHHGCN NIAQVTPAEP SLLIVIDEFH ALKDQLPDYM PRLIRIASVG RSLGMHIIAG
TQNPLAQVSA DMKANISINI CLRVRDGMQS QELLGTAHAA RISPNTPGAA YYNIGEGVEA
LRCAQSSNPA HLVRAIQLAG RFCHHDHSPE LFSKPLPSIL SAKQLAEYSN NYKYKNSEQK
ISQSLRTQEF YTKHIIIGLQ DDTIHLYPAL LPIHLGNIAV IGSRKQGKTT ILKIISKTLN
LPIYSGKSLY EQNINNIYNE NTPIIIDDAD ELLDPLNTKQ TAIAFQKRLN SKQCPVIMST
STSRYLRLPE QAPVRIIFPT GDVGTDTMLG IPSALSKSFD IEDYQLPGRC VLITPGSASL
TQIVHLE
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