| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0479 |
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| Symbol | |
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| ID | 8708813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 522903 |
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| End bp | 523742 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482593 |
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| Product | putative sporulation initiation inhibitor protein Soj |
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| Protein accession | YP_003373720 |
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| Protein GI | 283782966 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1192] ATPases involved in chromosome partitioning |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACTG ATTTACTTGG ACGCGAATAC GAAACTTTTC ATGCACCAGA GCCGTTAACT
TCACATGGTC CTGCTCGCAT TATTGCAATG TGCAACCAGA AAGGTGGAGT TGGTAAAACT
ACAAGCTCCA TTAATATTGC TGGCGCACTA AGTCAGTATG GTCGTCGCGT TTTGATTGTT
GATTTCGATC CGCAAGGTGC AGCAACAGTT GGACTTGGAA TTAACGCAAA TGCGCTTGAT
AATACAGTTT ATACGGCATT ATTTGATTCG TCTGTAGACG TTCACGACGT AATTCGTCAT
ACTGAAACAG AAAATATTGA TATTATTCCT GCAAATATTG ATTTATCCGC AGCTGAAGTT
CAGTTAGTAA CCGAAGTAGG ACGAGAGCAA ATATTGGCAG GTGTATTGCG CAAAGTGCGC
GACGAATACG ATGTTATTAT AGTCGATTGT CAGCCTTCTC TTGGCTTGCT TACTGTAAAC
GCGTTAACGG CAGCTGATGG TGTGATTATT CCACTTGCTG CAGAGTTTTT TGCTCTTCGA
GGCGTGGCTC TTCTTATGCA ATCAATTGAG AAGGTACAAT CTCGTATTAA TCCAAATCTT
AAAGTATTTG GAGTTCTTGT CACTATGTAC ACTCGCACAC TTCATAGTGA GGAAGTGTTG
CAGCGCATTT ATGAAGCTTT CCAAGATCGC GTTTTGCACT CTGTGATTTC GCGTTCTATT
AAGCTGCCAG ATTCTACAGT TGCTGCAGTT CCTATCACTA TTTTTGCTCC TGAACACAAG
ACTGCAAAAG AGTACCGCGA AGTTGCGCGT GAGCTTATTG CTAAAGGTGT TGTTGCGTAA
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| Protein sequence | MPTDLLGREY ETFHAPEPLT SHGPARIIAM CNQKGGVGKT TSSINIAGAL SQYGRRVLIV
DFDPQGAATV GLGINANALD NTVYTALFDS SVDVHDVIRH TETENIDIIP ANIDLSAAEV
QLVTEVGREQ ILAGVLRKVR DEYDVIIVDC QPSLGLLTVN ALTAADGVII PLAAEFFALR
GVALLMQSIE KVQSRINPNL KVFGVLVTMY TRTLHSEEVL QRIYEAFQDR VLHSVISRSI
KLPDSTVAAV PITIFAPEHK TAKEYREVAR ELIAKGVVA
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