| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0475 |
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| Symbol | infC |
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| ID | 8709072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 520413 |
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| End bp | 521174 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646482589 |
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| Product | translation initiation factor IF-3 |
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| Protein accession | YP_003373716 |
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| Protein GI | 283782962 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
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| TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCTTA AGCTCTTGGA CTTCTTGGTG TATTACATCT TACAAGTATT TAGAAGGATT
GGAGTCATCA TTAGCGACGA ACCACGCATT AACGAGGAAA TTCGAGTCCC TCAGGTGCGC
CTTATTGGTC CAAAGGGCGA GCAAGTGGGA GTTATCGCAA CCTCTGTCGC GTTAAACCTT
GCAAGGGAAG CTAACCTCGA TCTTGTCGAA GTTGCACCTA CTGCTAAGCC TCCAGTAGCC
AAGCTTATTG ACTACGGTAA GTACAAGTAC AACGAAAAGA TTAAGGCTCG TGAAGCACGT
CGTAATCAGA CCGTCGCAGA GGTTAAGGAA ATTCGTTTCC GTCTCAAGAT TGACGATCAT
GATTTCGATG TGAAGAAAGG TCATGTGCTT CGTTTCTTGA ATGGCGGAGA CAAGGTAAAA
GTAACTATTA TGTTGCGTGG CCGTGAGCAA TCTCGTCCGG TTGGTGGCGT TGAATTGTTG
CGCCGACTTG CAGATGAGGT CTCTGAAAGT GGCACAGTAG AGTTTGCGCC AAAGCAAGAA
GGTCGAAATA TTATTATGAC TCTTGCTCCA AAAGGCAAGA AAATTCATAC ACAGTCTGAG
CAGCGTCGTC GTGGCGCTGA ATCTCGCGCT GAGCGTCAAG CTCGTCAGGC TGCTCGTCTT
GCAGCTAAGC AAGAAGTTCA GTCACAAGCT GCAGCTGCAG TAAATGCTAT GCAATCCGAT
CAACATCACA AGGAGGGCAG CAATGCCGAA GATGAAAACT AA
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| Protein sequence | MNLKLLDFLV YYILQVFRRI GVIISDEPRI NEEIRVPQVR LIGPKGEQVG VIATSVALNL
AREANLDLVE VAPTAKPPVA KLIDYGKYKY NEKIKAREAR RNQTVAEVKE IRFRLKIDDH
DFDVKKGHVL RFLNGGDKVK VTIMLRGREQ SRPVGGVELL RRLADEVSES GTVEFAPKQE
GRNIIMTLAP KGKKIHTQSE QRRRGAESRA ERQARQAARL AAKQEVQSQA AAAVNAMQSD
QHHKEGSNAE DEN
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