Gene HMPREF0424_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0457 
Symbol 
ID8709348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp501839 
End bp502297 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content45% 
IMG OID646482572 
Productcell division family protein 
Protein accessionYP_003373701 
Protein GI283782947 
COG category[S] Function unknown 
COG ID[COG1799] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGCT TTATGAAGAA CGTGATGTCA TACGTTGGTA TGGCAGATGT GCCTGAGGAT 
GATGATTATG CTGAATCTGA TGTTCAAGAA ACGTCATTCG ATAATGATCG CTCGGTAACT
CCTGCTGTGT CGCAACATGG TAATGATTTG CGTGGTGGTT CTGCTCGTGC GAATGCTAGT
CGTATGAGTC GTATTACTAC AATTCATCCT AAGTCTTACG ATGATGCGCA AATGGTGGGT
CGTGCTTTGC GTGACGGTGT TCCAGTGGTT TTAAACCTTA CTGGTGTAAC TGAATCGGTT
GCGTATCGTA TTGTTGATTT TTCTGCTGGA GTTGTATTTG GTGTTCGCGG TTCTATTGAG
CGTGTGACTC CTAGGGTATT TTTGCTAAGC CCGGCACAAG TGAATATCAA AGTGGAGGAT
GCTCCGAACG ACAATACTGC GCGTGACTTG TTCTCCTAA
 
Protein sequence
MAGFMKNVMS YVGMADVPED DDYAESDVQE TSFDNDRSVT PAVSQHGNDL RGGSARANAS 
RMSRITTIHP KSYDDAQMVG RALRDGVPVV LNLTGVTESV AYRIVDFSAG VVFGVRGSIE
RVTPRVFLLS PAQVNIKVED APNDNTARDL FS