| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0385 |
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| Symbol | sufC |
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| ID | 8709141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 415129 |
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| End bp | 415905 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646482501 |
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| Product | FeS assembly ATPase SufC |
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| Protein accession | YP_003373635 |
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| Protein GI | 283782881 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
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| TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.686208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAACTT TGGAAATTAA GGATTTGTAC GCTTCTGTAG AAACAAAAGA AGGTCGCAAG
CAAATCTTAA AAGGCGTAAA TCTTACAGTT AATTCTGGCG AAACTCACGC AATCATGGGT
CCTAACGGAT CTGGAAAGTC TACTCTTGCC TACACTTTGG CAGGACACCC AAAGTATGAA
GTCGATTCGG GTCAAGTTCT TCTCGACGGC GAAGATATTT TGAAAATGAC TCCTGATGAG
CGCGCAAAAG CTGGATTATT CCTCGCAATG CAATATCCAG TAGAGGTACC GGGCGTATCT
ATGACGAACT TCCTTCGTAC TGCAAAAACT GAAGTCGAAG GCAAAGCTCC ATCTTTAAGA
AGCTGGGTGA AAGAACTTAG CGAGGCTATG AAAAAGCTTC GAATGGATCC AAAATTTGCG
TCGCGTTCTG TAAACGAAGG CTTCTCCGGC GGCGAAAAGA AGCGTGCGGA AGTTTTGCAA
TTAGAGCTTT TGAAACCAAA GTTTGCAATT TTGGATGAAA CTGATTCTGG TCTAGACGTT
GACGCGCTTC GAATTGTGTC TGAAGGCGTG AATCGCGCCA AAGAGAACAC CGGTTTGGGC
ATTATGATGG TCACGCATTA CACGCGAATC CTCAAGTATA TTAAGCCGGA TATTGTGCAC
GTTTTTGCGC AAGGTCACTT TGTAAAGACT GCAGGACCGG AGCTTGCGGA CGAGCTGGAA
GAAGAAGGCT ACGACAAGTA TTTGCCGGAA GGTGCAACTG AGTCGGCACT GGCTTAA
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| Protein sequence | MSTLEIKDLY ASVETKEGRK QILKGVNLTV NSGETHAIMG PNGSGKSTLA YTLAGHPKYE
VDSGQVLLDG EDILKMTPDE RAKAGLFLAM QYPVEVPGVS MTNFLRTAKT EVEGKAPSLR
SWVKELSEAM KKLRMDPKFA SRSVNEGFSG GEKKRAEVLQ LELLKPKFAI LDETDSGLDV
DALRIVSEGV NRAKENTGLG IMMVTHYTRI LKYIKPDIVH VFAQGHFVKT AGPELADELE
EEGYDKYLPE GATESALA
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