| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0288 |
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| Symbol | |
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| ID | 8708819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 308867 |
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| End bp | 310111 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646482406 |
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| Product | riboflavin kinase |
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| Protein accession | YP_003373543 |
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| Protein GI | 283782789 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0196] FAD synthase |
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| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCA TCGACATTCG ACCAGATGCC AACGGCATGA TTAATTGGCC AACGTTAAGT
GCAGAGCGTA AAGCGGTTGT TACCATTGGC GTATTCGACG GTATGCACAA AGGTCATCGC
GAGGTTATTC GTCGTACTGT GGATCTTGCG CATCGTCATG GAGCGTTTTC AGTAGTGATT
ATGTTTGATC CGCGTCCAAG CGTAGTGCAT GCTAATCCTG ATTTATACGA TGATTTTGGC
GACGTTAATT CTAAACTTCC GGACGATCCG GATGCTCTTA CAAGCGTGCG TCAACGTTTG
CGCGTGATGT CACAGTTGGA TGTTGATCAT GTTGTGATTG TGCGCTACAG CCTTGCTTTT
GCTGCAAAAT CGTACCGTTT CTTCTTAGGT CAGCTCGTTG GAAAGCTTGG TATGCGAGCA
TTAGTTCTTG GCTCTGATGC TGCGCTTGGT GCTCGTCGTG CTGGTGATAT CAAAGCAATT
CGTGAGTTGT CTCAAGCAAC TGGAGTTTTT GAGCTTATTG AAGTAGAGGA TTTGGGTCCA
GATGACGTTC GCGTGCCTGA TCCTATTGTT CGTGAAGTTC CACAGGAGCC TGGAGATCCT
AAAGATCCTT CTGAGGGCAT GAATAAAGCT GAATATCGTG CTTGGAGTAA GAGCATGCCA
AATAAGAAAG TGCGTGCTTG GAGTTCTACA AATGTGCGCT GGATGTTGGC TACTGGTCGA
GTCAAAGAAG CGCGTGAAAT TTTGGATCAG CCGCATCGCG TTGAAGGAAC AGTAGTTCAT
GGAGACGAGC GTGGGCGCGA GATTGGATTC CCAACAGTAA ATCTTGGCGA AAAAATTGAA
GGCTATGTGC CAGTTGATGG CGTGTACGCA GGCTGGGTTG TTGATTTAGA TGCTGACAAT
AAGAACGATG TCAGACCATC GAAAAATGCT GTTCCAGATG TGAGTGTTTT GCGTCGTGAT
GAGCTTCATT TAGGCGTTCA TTCTCCGTGG CGTTGGCCTG CTGCGATTTC TATTGGAACT
AAGCCAACAT TTAATAAAGA TGGCGAAGAA GATGCAGAGC GCACTGTTGA AGCTTACGGA
TTGTTCGACG ATTGGAAAGA CTTGTACGGG CATCGCGTTT GCATTGAGTT TGCTAGTTTC
TTGCGTCCGC AACAGGCTTT TGACTCAGTT GACGCGCTAA AAGATATGCT CAAAGCTAAT
GTTGAGCAAG TGCGTGAGAT TACAGACGCT GAAGCTGAAG TCTGA
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| Protein sequence | MKVIDIRPDA NGMINWPTLS AERKAVVTIG VFDGMHKGHR EVIRRTVDLA HRHGAFSVVI
MFDPRPSVVH ANPDLYDDFG DVNSKLPDDP DALTSVRQRL RVMSQLDVDH VVIVRYSLAF
AAKSYRFFLG QLVGKLGMRA LVLGSDAALG ARRAGDIKAI RELSQATGVF ELIEVEDLGP
DDVRVPDPIV REVPQEPGDP KDPSEGMNKA EYRAWSKSMP NKKVRAWSST NVRWMLATGR
VKEAREILDQ PHRVEGTVVH GDERGREIGF PTVNLGEKIE GYVPVDGVYA GWVVDLDADN
KNDVRPSKNA VPDVSVLRRD ELHLGVHSPW RWPAAISIGT KPTFNKDGEE DAERTVEAYG
LFDDWKDLYG HRVCIEFASF LRPQQAFDSV DALKDMLKAN VEQVREITDA EAEV
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