| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0276 |
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| Symbol | rpsK |
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| ID | 8709424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 296291 |
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| End bp | 296689 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646482394 |
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| Product | 30S ribosomal protein S11 |
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| Protein accession | YP_003373532 |
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| Protein GI | 283782778 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0100] Ribosomal protein S11 |
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| TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGCTG CAAAGCAAGC CTCGCGCAAG CCGCGTCGCC GGGACCGCAA GTCGGTGCCG
GTTGGGCAGG CGCATATTAA ATCAACATTC AATAACACGA TTATCTCCAT TACCGATCCA
TCCGGTGCAG TCCTTTCTTG GGCTTCCGGC GGTGATGTCG GCTTTAAGGG TTCCCGTAAG
TCGACTCCTT ACGCTGCAGG TATGGCTGCT GAGTCTGCTG CACGCAAGGC AATGGAGCAT
GGCCTCAAGA AGGTCGACGT GTTTGTTAAG GGTCCAGGTT CCGGTCGTGA AACCGCTATC
CGTTCCCTCC AGTCCGCGGG TCTCGAAGTT GGTTCTATTA CCGACGTTAC CCCACAAGCG
CATAACGGCG TACGCCCACC AAAGCGTCGC CGCGTCTGA
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| Protein sequence | MAAAKQASRK PRRRDRKSVP VGQAHIKSTF NNTIISITDP SGAVLSWASG GDVGFKGSRK
STPYAAGMAA ESAARKAMEH GLKKVDVFVK GPGSGRETAI RSLQSAGLEV GSITDVTPQA
HNGVRPPKRR RV
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