| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0269 |
|---|
| Symbol | rpmD |
|---|
| ID | 8709393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gardnerella vaginalis 409-05 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013721 |
|---|
| Strand | + |
|---|
| Start bp | 292423 |
|---|
| End bp | 292605 |
|---|
| Gene Length | 183 bp |
|---|
| Protein Length | 60 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 646482388 |
|---|
| Product | ribosomal protein L30 |
|---|
| Protein accession | YP_003373526 |
|---|
| Protein GI | 283782772 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1841] Ribosomal protein L30/L7E |
|---|
| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAATT TGAAGATCAC TCTGGTGCAT GGTTTAGTTC ATACAACTGA GCGCCAGCGC
GCGAATGTTC ATACGCTCGG CCTTCATAAG ATTGGTCACA GCGTAGTTCG CGAGGACACC
CCCGTCAATC GTGGCTTGGT TATGGCCGTT CGTCACTTGG TGAGCGTCGA GGAGGTCGAC
TGA
|
|---|
| Protein sequence | MSNLKITLVH GLVHTTERQR ANVHTLGLHK IGHSVVREDT PVNRGLVMAV RHLVSVEEVD
|
|---|
| |