Gene HMPREF0424_0258a details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0258a 
Symbol 
ID9715066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp286313 
End bp286591 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content52% 
IMG OID 
Product30S ribosomal protein S19 
Protein accessionYP_003864087 
Protein GI304653863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGTA GCATCAAGAA GGGCCCTTTC GTCGACGCCC ACTTGCAGAA GAAAGTCGAC 
GAGCAAAACG ACAAGGGTAC GCACAATGTC ATTAAGACTT GGTCGCGTCG TTCGATGATC
ACTCCTGATT TCATTGGACA CACCTTTGCC GTACATGATG GCCGCAAGCA TGTGCCGGTA
TTCGTTACCG AAGCCATGGT TGGTCATAAG CTCGGTGAGT TCGCCCCGAC CAAGACCTTT
AAGGGTCATG TGAAGGACGA CAAAAAGGCA CGCCGCTAA
 
Protein sequence
MTRSIKKGPF VDAHLQKKVD EQNDKGTHNV IKTWSRRSMI TPDFIGHTFA VHDGRKHVPV 
FVTEAMVGHK LGEFAPTKTF KGHVKDDKKA RR