| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0258 |
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| Symbol | rplB |
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| ID | 8709733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 285467 |
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| End bp | 286297 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646482377 |
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| Product | ribosomal protein L2 |
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| Protein accession | YP_003373515 |
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| Protein GI | 283782761 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCC GCGTTTATAA GCCGACGACT GCAGGCCGTC GCAACGCTTC GGTTTCGGAT
TTTGCCGAGA TCACGCGTTC TACGCCTGAA AAGTCGCTGG TACGCAAACT CAGCAAGACT
GGTGGTCGTA ACTCTTACGG CCGCATGACT TCTCGCCATC GCGGCGGTGG TCACAAGCGT
CAGTATCGTC TCATCGACTT CAAGCGTTGG GACAAGGATG GCGTGCCAGC AAAGGTCGCT
CATATTGAGT ATGACCCTAA CCGTTCCGCT CGCATCGCTT TGTTGCATTA CGCAGACGGT
GAGAAGCGTT ACATTATCGC TCCTGAAGGC GTTGCCCAGG GTGATGTTAT TGAGACCGGC
GCTCAGGCTG ATATTAAGCC AGGCAACAAC CTGCCTCTGA AGAATATCCC AACTGGTACC
GTGGTTCACG CAATTGAGCT TCGTCCACTT GGTGGTGCGA AGATTGCTCG TTCCGCTGGT
GCTGCTGTTC AGCTCGTCGC TAAGGATGGT GCTTATGCGC AGTTGCGTAT GCCATCTGGC
GAAATTCGTA ACGTGGACGC TCGTTGCCGC GCTACTGTTG GCGAAGTAGG TAATTCCGAT
CACGCCAATA TCGAGCTTGG TAAGGCAGGT CGCGCACGTT GGCTTGGTCG TAGACCAATC
ACCCGAGGCG AATCCATGAA CCCTGTGGAC CATCCACATG GTGGTCGCAC CCGTGGTGGT
AAGCCACCAG TTTCTCCATG GGGCAAGGGC GAGGTTCGTA CACGTCGTCC AAAGAAGGCT
TCGAACAAGA TGATTGTTCG TCGTCGCCCG AATGGTAAGA ACCGCAAGTA A
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| Protein sequence | MAIRVYKPTT AGRRNASVSD FAEITRSTPE KSLVRKLSKT GGRNSYGRMT SRHRGGGHKR
QYRLIDFKRW DKDGVPAKVA HIEYDPNRSA RIALLHYADG EKRYIIAPEG VAQGDVIETG
AQADIKPGNN LPLKNIPTGT VVHAIELRPL GGAKIARSAG AAVQLVAKDG AYAQLRMPSG
EIRNVDARCR ATVGEVGNSD HANIELGKAG RARWLGRRPI TRGESMNPVD HPHGGRTRGG
KPPVSPWGKG EVRTRRPKKA SNKMIVRRRP NGKNRK
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