| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0234 |
|---|
| Symbol | groS |
|---|
| ID | 8708982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gardnerella vaginalis 409-05 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013721 |
|---|
| Strand | + |
|---|
| Start bp | 263235 |
|---|
| End bp | 263528 |
|---|
| Gene Length | 294 bp |
|---|
| Protein Length | 97 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646482353 |
|---|
| Product | chaperonin GroS |
|---|
| Protein accession | YP_003373495 |
|---|
| Protein GI | 283782741 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0234] Co-chaperonin GroES (HSP10) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGATTA AGCTCACACC GTTGGAGGAT AAGATTATTG TTAAGCAAGC TCAAGCGGAA
ACTCAGACTG CTTCTGGCTT GTATATTCCA GATAATGCCA AGGAAAAGCC ACAGCAGGGT
GAAGTTCTTG CCGTAGGTCC TGGTCGTCGC GACGATAAGG GCGAGCGCAT TCCTATGGAT
GTTAAGGTTG GAGACAAGGT CCTTTATTCC AAGTACGGCG GAACTGAAGT GCATTATGAA
GGTGAGGACT ACTTAATCGT GTCTTCTCGT GATGTGCTTG CAATTCTTGG CTAG
|
|---|
| Protein sequence | MSIKLTPLED KIIVKQAQAE TQTASGLYIP DNAKEKPQQG EVLAVGPGRR DDKGERIPMD
VKVGDKVLYS KYGGTEVHYE GEDYLIVSSR DVLAILG
|
|---|
| |