Gene HMPREF0424_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0143 
Symbol 
ID8709186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp165036 
End bp165269 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content50% 
IMG OID646482262 
Productputative F0F1 ATP synthase subunit C 
Protein accessionYP_003373407 
Protein GI283782653 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGTA TCATCGCTCT CGCAGGATTG ACGGGCAACC TTAGCATTCT CGGCTTTGCC 
GTTGCTACTC TTTCCCCTGC TATCGGAATG GCAATGGTTG TATCCAAGGC TATGGAATCC
ACTGCGCGCC AGCCAGAAGT CGGCAACCGT ATTCAGTTGT TCATGTTTAT TGGCTTGGCA
TTCATCGAGG TTCTGGGCTT GCTCGGATTC GTTGCCTACA TTATGGGAAG CTGA
 
Protein sequence
MNSIIALAGL TGNLSILGFA VATLSPAIGM AMVVSKAMES TARQPEVGNR IQLFMFIGLA 
FIEVLGLLGF VAYIMGS