| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0142 |
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| Symbol | atpB |
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| ID | 8708845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 164081 |
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| End bp | 164935 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482261 |
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| Product | ATP synthase F0, A subunit |
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| Protein accession | YP_003373406 |
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| Protein GI | 283782652 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGTGA TGGTTGATGT TTTACAGAAG ACCACAACTG TAGCTTCTAC TGTAGCTTCG
AATAAACCAG AGCTACCTGA TATTAGTGAG TTTTTGCCTC CAGAAATTTT GTTCCAAGGC
ACTCCATTTG CCATGAATCG AATTGTTATG GTGCGTCTTA TTATGGCCGT AATCGTTATG
ATTATTTTTG GCATTGGTGC AGCTCGCGCA AAAGTGGTTC CAGGAAGATT CCAAAGCGTG
TTAGAAATAC TAATGGACTT TGTGCGATTT AACATTGTGT ACGAAATGAT TGGCGAAGAG
CGCGGCAAGC GTTATGTGCC AATGATGACA ACTCTTTTTA TAACAATATT CTTCTTTAAT
CTTTGCTCAG TTATTCCAGG CTTAAACATG GCTGCAACAG CAACTATTAC AGGTCCATTA
GTGTTTGCAC TTTGGGTTGT ATGCCAATAC TTAATTACTG GAATTAGAGA AAAAGGATTC
CTAACGTTCT TCCGCGAATC CTTGTTCCCA GCAGGCGTGC CATGGCCAAT TTACTTTATT
CTTACGCCAT TGCAGCTGCT GGAATTATTG ATTGTGCGAC CACTTTCGCT TACAATCCGT
TTGTTTGCGA ATATGATTGC TGGCCATTTG CTGGTGGCCA CTTGCCTAGT ATTCACCAAC
TTCTTTGTGG TGGATTCCAG CAATAAACTC CTTGCCTTAG GCGGTGCATT ATGGCTGCTT
GGTGGCATTC TGTTTACAGT ATTCGAAGTA ATAGTCGCAG GTTTGCAGGC GTTTATTTTT
ACCGTTCTTG CATCTGTGTA TATTTCGGAA AGTTACCCCG AGAAAGAAGA AAAATCTGCT
GTTGCTATTG CATAA
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| Protein sequence | MNVMVDVLQK TTTVASTVAS NKPELPDISE FLPPEILFQG TPFAMNRIVM VRLIMAVIVM
IIFGIGAARA KVVPGRFQSV LEILMDFVRF NIVYEMIGEE RGKRYVPMMT TLFITIFFFN
LCSVIPGLNM AATATITGPL VFALWVVCQY LITGIREKGF LTFFRESLFP AGVPWPIYFI
LTPLQLLELL IVRPLSLTIR LFANMIAGHL LVATCLVFTN FFVVDSSNKL LALGGALWLL
GGILFTVFEV IVAGLQAFIF TVLASVYISE SYPEKEEKSA VAIA
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