| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0104 |
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| Symbol | gatC |
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| ID | 8709969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 123833 |
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| End bp | 124129 |
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| Gene Length | 297 bp |
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| Protein Length | 98 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646482225 |
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| Product | glutamyl-tRNA(Gln) amidotransferase, C subunit |
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| Protein accession | YP_003373371 |
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| Protein GI | 283782617 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
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| TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.434557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTACAT TCACACGCGA AGAAATTGAG CATTTGGGCG TTCTATCCCA GATTGCGCTT
AGCGACGAAG AAATCAGTCG CTTGCAAGGC GAATTAAACG TCATTGCAGA ATCTATTAAC
AAAGTGCAGG AAGTTGCTGG CGAAGATGTG CCACCTACTG CAAATCCAGT ACCTCTTGAA
GCGTATTTGC GCCCAGACGA GCCTGCTACG CCATTGACTC AAGAAGAAGC GCTTTCTGGC
GCTCCTAGAA GTGAGTCTGG CATGTTTGTA GCACCTCGAA TTTTGGGGGA GGAATAA
|
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| Protein sequence | MPTFTREEIE HLGVLSQIAL SDEEISRLQG ELNVIAESIN KVQEVAGEDV PPTANPVPLE
AYLRPDEPAT PLTQEEALSG APRSESGMFV APRILGEE
|
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